KEGG   Aspergillus fumigatus: AFUA_5G13860
Entry
AFUA_5G13860      CDS       T01017                                 
Name
(RefSeq) RNA annealing protein Yra1
  KO
K12881  THO complex subunit 4
Organism
afm  Aspergillus fumigatus
Pathway
afm03013  Nucleocytoplasmic transport
afm03015  mRNA surveillance pathway
afm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AFUA_5G13860
  09122 Translation
   03013 Nucleocytoplasmic transport
    AFUA_5G13860
   03015 mRNA surveillance pathway
    AFUA_5G13860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afm03019]
    AFUA_5G13860
   03041 Spliceosome [BR:afm03041]
    AFUA_5G13860
Messenger RNA biogenesis [BR:afm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     AFUA_5G13860
    TREX complex
     AFUA_5G13860
Spliceosome [BR:afm03041]
 Complex C
  Other components
   EJC/TREX
    AFUA_5G13860
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AFUA_5G13860
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 3510717
NCBI-ProteinID: XP_753268
UniProt: Q4WVZ6
Position
5:complement(3637683..3638302)
AA seq 170 aa
MLTYNQNGTSRGIASIVFSRPDTAAKAAKELNGLLVDGRPMKIEVVVDASHAPSVPAPKP
LTERVAQVKSQPKPATAAKAANTTRGRGARRGRRGGGRSSNRPKPKTVEELDAEMVDYFA
SNENAGPADANAPAAANGAVQQPAAGGEDLGMAEISVSFADFNAHWTHRH
NT seq 513 nt   +upstreamnt  +downstreamnt
atgctcacttacaaccagaacggcaccagtcgtggtattgcttcgattgtcttcagcaga
cctgacacagccgccaaggctgccaaggagttgaatggcctccttgttgatggaagaccc
atgaagattgaagtagtggttgacgcttcccacgctccaagcgtgccagcacccaagcct
cttacagagcgcgtcgctcaagttaaatcccagcccaagcctgccacggccgccaaggcc
gccaacaccactcggggccgtggcgcacgccgtggccgccgtggtggtggccgcagctca
aaccgtcctaagccgaaaaccgtcgaagagctcgatgccgagatggttgactactttgct
agcaatgagaatgctggccccgcagatgccaatgcccctgccgctgcaaacggcgctgtt
cagcagcctgccgccggtggtgaggatcttggaatggccgagatctctgtaagcttcgct
gattttaatgctcactggacgcacagacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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