KEGG   Aspergillus fumigatus: AFUA_6G13410
Entry
AFUA_6G13410      CDS       T01017                                 
Name
(RefSeq) nuclear mRNA splicing factor
  KO
K12830  splicing factor 3B subunit 3
Organism
afm  Aspergillus fumigatus
Pathway
afm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AFUA_6G13410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afm03021]
    AFUA_6G13410
   03041 Spliceosome [BR:afm03041]
    AFUA_6G13410
   03036 Chromosome and associated proteins [BR:afm03036]
    AFUA_6G13410
Transcription machinery [BR:afm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     AFUA_6G13410
Spliceosome [BR:afm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    AFUA_6G13410
 Complex B
    AFUA_6G13410
 Complex C
   U2 SnRNP specific factors
    AFUA_6G13410
Chromosome and associated proteins [BR:afm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     AFUA_6G13410
    TFTC complex
     AFUA_6G13410
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 3508529
NCBI-ProteinID: XP_751217
UniProt: Q4WLI5
Position
6:complement(3410327..3414441)
AA seq 1225 aa
MATTSNMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIY
SQDVFGIIRTLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALD
VGYENPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASM
LFQVPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKM
RGAFFFLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLY
VASEAGNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFQPRGAENLNLVETLNSL
NPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRADEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI
RHILADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMS
GTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMS
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAV
LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL
DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGETNVLP
PEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETFLVVG
TAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLR
IYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDS
VSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNR
LDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQL
ASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SVRYANEGSVLIILMAIPASVCKGL
NT seq 3678 nt   +upstreamnt  +downstreamnt
atggctaccacttcgaacatgttcatgtattccctgacgatccagcctccgactgcgatc
acacaagctattctgggccagtttgcagggactaaggagcaacagatcgtgacagcgtca
gggtcgaagctcacgattcatcgtcccgatccgactcagggcaagattacaccaatctat
tcccaggatgtcttcggtatcatccgtactctggcagcctttcggctggctggaagcagt
aaagattacataatcattggttcggactcgggacgtatcacgattattgaatatgttccc
tcccaaaatcggttcaaccgtatccatcttgagaccttcggcaagtccggtgttcgtcgt
gtcgttcctggtcagtaccttgcggtcgatccaaaaggtagagcttgtttgattgcctcc
gtggaaaagaataagctcgtttacgttctgaatcggaactcgcaggccgagctcacgatt
tcgtctcctctggaggcccacaagccgcagactgtggtctttgcgatgactgctctggat
gtcggctacgagaatcctatcttcgcggccctcgaggttgactattctgaggcggatcag
gatccaaccggtcgagcgtacgaagagtccgaaaaactgcttgtatattatgaacttgat
ctcggtctaaatcatgttgtccgcaagtgggccgatcctgttgaccgcacggcgtctatg
ctattccaggtgccgggaggtgccgatggtcccagtggtgtcttggtatgtgcagaggat
aacattacctaccggcactcaaaccaagatgcattcagagtcccgattcctcgacgcatt
ggtgcaactgaaaatcccgagcgcaagcgctctatcgtcgctggcgtcatgcacaagatg
aggggtgctttctttttccttcttcagactgaagatggcgacctgttcaaggttaccatt
gatatggtggaggatgacaacggacaactgactggcgaagttaagaggttgaagatcaaa
tattttgatacagtccctatcgcatccagtctgttgattctaaagagtggtttcctttac
gttgccagtgaagcaggaaaccatcacttctaccaattcgagaagctgggagacgacgac
gaagagactgaattcaacagtgaaaactttcctgcggatctctctgttccctgtgagccg
gtgttcttccaaccgagaggagctgaaaacctcaacctcgtcgagacgctcaactctctc
aaccctttgatcgatagtaagatcgtgaaccttaacgaggacgatgctcctcaaatctac
actgtgtctgggagtggcgcccggagcagcttcaggaccctcaagcacggtctggaagtc
tccgagattgtggaatcggagctccctagtgtgccttctgccgtttggactaccaagttg
actcgtgctgatgagtttgacgcttacattattctttctttcgcaaacggtactttggtt
ctcagcatcggtgagaccgttgaagaggtaaccgacaccggctttctttccactgcacct
actttggctgttcagcagctcggtgaggattcgctgattcaggttcacccgagaggcatt
cgtcatatccttgcagaccggcgtgtcaatgagtggcccgctcctcaacatcgttcgatt
gtcgctgctgcgacaaatgagcgtcaggtagcggttgccctcagctcaggtgaaatcgtg
tacttcgaaatggatgccgatggaacgctcgctgaatacgatgagagacgtcagatgtct
ggtacagtaacatgcctcagtttaggcgaggtgcctgaagggcgtgtgagaagttctttc
ttggctgtcggatgtgacgactctactgttcgcattctgagcttggatcccgactcgacc
ttggagaataagtcagtccaggctcttacctcggctccatcagcgttgaacatcatgtca
atggccgattcaagctcaggaggtacgacgctgtacctgcacattgggctctactccggt
gtctacctccgaactgttctcgacgaggtgactggtgaactttccgatactcgtacccgg
ttcctgggagctaagccagtcaagctattccgtgtttccgtcaaaggacaaacggctgtt
ctcgccctcagctcccgaccatggttgggctactccgacatccagacaaaaggtttcatg
ctcaccccgttggattacgtgggcttggaatggggctggaatttctccagtgagcagtgt
gttgaaggcatggttggtatccaggcacagaatcttcggattttctctatcgagaagttg
gacaacaacatactgcaggagtcaattcccctttcaaacacgccccgtcgtatgcttaag
catccagaacagccattgttctatgttatcgaatccgacaacaatgtcctatcgccggct
acgagagccaggctgatcgaagattccaaggcgcgtaatggcgagacaaacgttcttccg
cccgaagatttcggctatccacgggctacaggtcactgggcgtcttgtattcaaattgtc
gatcctctggatgccaaagccgtgatctcgacgattgaactcgaggagaacgaggccgcc
gtcagcatggcagcggtacccttctcgagccaggacgatgagacatttctggtggtggga
acggctaaggatatgattgtcaaccctccctcgtcagcgggaggtttcatccacatttac
aggtttcaagaagatgggaaggagctggagttcattcacaagacgaaggtggaagagcca
cctcttgctctcctcggattccagggacgtcttcttgccggcatcggctctacccttcgg
atctatgacttgggaatgaaacagctgctccggaaatgtcaggctcaggtggtgtcgaag
acgattgttgggctccagacacaaggtagccggattgttgtcagcgacgttcgcgaaagc
gtgacgtatgtcgtatacaagtaccaggataacatcttgattcctttcgttgatgattcc
gtttctcgctggacgacgagtaccaccatggtagactacgagactgttgccggtggtgac
aaatttggtaacctctggctcgtgcgctgtcccaagaaggcctcggaggaggcggatgag
gatggatcgggagcccatctgattcatgagcgcggttatctgcatggcgcaccgaatcgc
ctggatctgatgatccacacctacacacaagatatcccgactagcttgcacaagacacaa
ctcgtagcaggtggacgggatatccttgtgtggaccgggtttcagggtacaattggcatg
cttgtgcctttcgtgagccgcgaggatgtggactttttccagaacctagagatgcaacta
gcatcacagtgcccacccctcgccggacgggatcatctcatctatcgcagctattatgca
ccagtcaaaggtgttattgatggagatttgtgcgaaatgtatttcttactgcctaatgac
acgaagatgatgattgcagcggaactggatcgttccgtcagggagattgagcggaagatc
tcggtaagatatgcgaacgagggtagcgtactaataattctgatggcaattccggcgtct
gtgtgcaagggtctatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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