KEGG   Acidaminococcus fermentans: Acfer_1353
Entry
Acfer_1353        CDS       T01151                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
afn  Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:afn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:afn03016]
    Acfer_1353
Enzymes [BR:afn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Acfer_1353
Transfer RNA biogenesis [BR:afn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Acfer_1353
 Prokaryotic type
    Acfer_1353
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ADB47713
UniProt: D2RKW1
Position
complement(1499118..1500011)
AA seq 297 aa
MDGIFNVLKPPGMTSHDVVGALRKILHMKKIGHGGTLDPLAAGVLPVFTGMATRFLEYAA
HEEKSYRAELTFGFQTDTGDTEGAVIAESPVRDLTAEEIEAALASFRGEGTQIPPMYSAI
SVGGTKLYKLARQGIEVKREPRPITLYELEKVDYTGKTLVFDVTCSKGTFIRTLCEDLAA
KLGMKGTMSFLLRRRAGVFRLEDAHTLQEIAADPEGCCMGVEPILAGFPKKIVNALQGRR
IAQGVATTLPGLTEGTLYQLWTRDGVLVGLARAVDGRLRAHKIIHIPDVETRTEEQP
NT seq 894 nt   +upstreamnt  +downstreamnt
atggatgggattttcaacgtactcaaaccaccgggcatgaccagccatgatgtggtgggg
gccctgcggaaaatcctccatatgaagaaaatcggccacgggggcaccctggatcccctg
gccgccggggtgctgccggtgttcaccggcatggccacccgattcctggaatacgcggcc
cacgaggaaaaaagctaccgggcagagctgaccttcgggtttcagaccgacaccggggat
acggaaggggcggtgatcgccgaaagtcccgtacgggacctgacggcagaggaaatcgaa
gccgccctggcctccttccggggggaagggacccagatcccgcccatgtattccgccatc
agtgtggggggcaccaagctgtacaagctggcccgacagggcatcgaagtgaagcgggag
ccccgtcccatcactctctatgaactggaaaaggtggattacaccggaaagaccctggtg
ttcgacgtgacctgctccaaggggacttttatccggaccctgtgtgaggacctggcggcg
aagctggggatgaaggggaccatgagtttcctgctccggcggcgggccggggtcttccgg
ctggaagacgcccataccctccaggagatcgccgccgatccggaaggctgctgcatgggg
gtggaacccatcctggccggctttcccaaaaagattgtgaatgccctccaggggcggcgg
atcgcccagggagtggccaccaccctgcccgggctgacggaagggaccctgtaccagctg
tggacccgggacggggtgctggtgggactggcccgtgccgtggacggccggctccgggcc
cacaagatcatccacatcccggacgtggaaacaaggacggaagaacaaccatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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