KEGG   Alcaligenes faecalis JQ135: AFA_03750
Entry
AFA_03750         CDS       T05446                                 
Name
(GenBank) hypothetical protein
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
afq  Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:afq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:afq03016]
    AFA_03750
Enzymes [BR:afq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     AFA_03750
Transfer RNA biogenesis [BR:afq03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AFA_03750
SSDB
Motif
Pfam: DAO Methyltransf_30 GIDA NAD_binding_8 FAD_binding_2 Pyr_redox_2 FAD_binding_3 FAD_oxidored HI0933_like Thi4 AlaDh_PNT_C 3HCDH_N Pyr_redox Lycopene_cycl
Other DBs
NCBI-ProteinID: ASR88644
UniProt: A0A9N7D7K7
Position
815709..817574
AA seq 621 aa
MAAFAFEPLVPADLEFNEHDVPVSALYQDSYHPADGPLGQARRVFLQGNGLPERWRGRSQ
FTICETGFGLGASFLATWQAWRQDPQRSQRLHFVSVEAHPFRQADLATLYARLPEQLQAQ
AQELLAAWPILVPGIHRLELDEGRVTLTLAFGQAETMMRELQCHADAFYLDGFAPRGNPA
MWSRSVLGQLVRLAAPGATAASWCCAGQVRRDLASVGFEVEKVPGAGGKWCTIRARLRPH
LGRRGSLPPQQGRVVVIGAGLAGAACAWELARKGVPVLVCDPALSRGLDATHQGHRLAAI
SPVFALDDAPLARLSRNAVLHAWQGWKGLPEAARPRRVGTLVFGQAGNSDADIQQALARL
ALDQDWVQWLDREQGSALAGVPLQGGGLYFPQGMVVDPSALVACLLDHPLIQCLPEHVFL
QAGLGPNAWDVCNQRGQCLESSNRVVIAAAAQSLSLLPDELLAAHPMPRLAAMQRLAGQV
TYLSVEQALTQGGVTLSGQGYILPVDPQGQVIGSTYERFGESAQVSHQGHQQNIEKVSAM
LANPAVRGEIPEQGWAGWRCALSDHLPVMGFVPGQPGLFMAAAYGSRGLSWSLLAASLFA
AYCLEEPIPLERRLEQALIPR
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggctgcctttgcgtttgagcctttggtcccggccgatttggaattcaatgagcacgac
gtgcctgtcagtgctctgtatcaggatagctatcacccggcagatggccccttgggccaa
gcccggcgggtttttctgcaaggcaatgggttgcccgagcgttggcgggggcgatctcaa
ttcacgatttgtgaaaccggctttggactgggagccagctttctggcgacctggcaggct
tggcgtcaggatccgcaacgcagccagaggctgcatttcgtctcggtagaggctcacccc
tttcgccaggccgatttggcgactctgtatgctcgcttgcccgagcagttgcaggctcaa
gcccaggagttgctggcagcctggcccatactggtgccgggtatacacaggctggagctg
gatgaggggcgggtcacgctgaccctggcctttgggcaagctgaaaccatgatgcgcgag
ctgcaatgccatgccgacgcgttttacctggatggttttgctccccgtggcaatcctgcc
atgtggtcgcgttcggttctggggcaactggtgcgtctggctgcgccaggggcgacagcg
gcttcctggtgctgtgcagggcaggtgcgacgtgatctggcctcggtagggtttgaagtg
gaaaaagtccccggtgccgggggcaagtggtgcactattcgcgctcgcttgcgtccccat
ctgggacgacgcggcagcttgccgccgcaacaggggcgggtggtagtgatcggtgctggt
ttggcgggggcggcgtgtgcctgggaactggcgcgtaaaggtgtgcctgttctggtttgt
gatccggccttgagccggggcctggatgccacgcatcaaggtcaccgtctggctgccatc
tctccggtattcgctctggatgatgctcccttggctcggttgagccgtaatgctgtgctg
catgcctggcaaggctggaaaggcttgccagaggcggcacgcccgcgccgagtcgggacg
ctggtatttggtcaggcgggcaatagcgatgcggatattcagcaggcgttggcgcgtttg
gctttggatcaggactgggtgcaatggctggatcgcgagcagggctcggccttggccgga
gtgcctttgcaaggcggtggcctgtatttcccgcaaggcatggtggtggatcccagtgca
ctggtcgcctgtctgctggatcaccctttgattcaatgccttccagagcatgtgttcttg
caagccggcctggggccgaatgcgtgggatgtctgcaatcagcggggacaatgcctggaa
agcagcaatcgtgtcgtgatagcggcagcggcccaaagcctgagcctgttgccagacgag
ctgctggcggcgcatcccatgcctcgcttggcagccatgcagcgtctggccgggcaggtg
acgtatttatctgttgagcaggcgttgacgcaaggtggagtgactttaagtggccagggc
tatatcctgcctgttgacccgcaggggcaagtcatcggtagcacctacgagcgttttggt
gaatctgcccaggtcagccaccagggacatcagcaaaatatcgaaaaagtttctgccatg
ctggccaatcctgctgtgaggggggagatacccgaacagggttgggccggttggcgttgt
gccttaagtgaccatttgcccgtgatgggttttgtgccgggccagcccggtttgtttatg
gctgcggcttacggctcacgtggtttgagctggagcctgctggcagccagtttgtttgcc
gcttattgtctggaggaacctattcctttggagcggcgtttggagcaagctttaatacct
cgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (34)   

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