KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_0447
Entry
AFE_0447          CDS       T00810                                 
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr02020  Two-component system
afr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:afr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFE_0447
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AFE_0447
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:afr02022]
    AFE_0447
Two-component system [BR:afr02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   AFE_0447
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_16 HrcA Zeta_toxin AAA_22 AAA
Other DBs
NCBI-ProteinID: ACK80813
UniProt: B7J4J0
Position
complement(387060..388445)
AA seq 461 aa
MPRPAPIILTIDDDPDFLRLLGLWLESEGYHVLASSDPVQGMQTLQTARPDLVITDLRMP
GMDGMAVLETVQALDPDLPVILLTAHGSIPNAVAAMRAQAFGYLSKPFSNEELQELTTAA
LAQRHAGQETRKLRAALRQQAGQSILHRSPAMAALVDELACVANSKASVFLSGESGSGKE
RVARAIHDASPRRDGPFVAVNCGAIPAGLAESELFGHVKGAFTGATQDHTGLIRSASGGT
LFLDEIADLPLTLQVKLLRVLQEGSLRPVGAKTEISVDLRVISATHQDIHALTADGTFRE
DLYYRLHVIPLRVPSLSERAEDIPLLAQHFLDRESQRMNRDILGFSPEALDKLMQRSWPG
NVRELENAVTFAAAVTEKGWVAADAIPDNGRQGGQSAFPPLQDAKAAFERGYLENLLRAT
DGNISRAARIAGRHRTDLYKLMRKHSLAPQLFKNPEDRDEE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgcccagaccagctcccatcatcctgaccatcgacgatgatcccgactttctgcgcctg
ctcggcctctggctggaaagtgagggataccacgtcctggccagcagtgatcccgtgcag
ggcatgcagacgttgcagacggccagaccggatctggtcatcaccgatctgcgcatgccc
ggcatggatggaatggccgtgctggagacggtgcaggccctcgatcccgacctccccgtt
atcctcctcaccgcccacggcagcatccccaacgccgtggcagccatgcgtgcccaggct
ttcggatatctgagcaaacccttcagcaatgaagagctccaggagttgaccaccgccgcc
ctggcgcagcgccacgccgggcaggaaacccgcaagctccgggcggcgttgcggcaacag
gccgggcagagcatcctccatcgtagccccgccatggcggcgctggtggatgagctggcg
tgcgttgccaactcgaaagccagcgttttcctttccggagaaagcggatccggcaaagaa
cgggtcgctcgtgccatccacgacgccagcccacgccgtgacggcccgttcgttgcggtc
aattgcggtgccatccccgccgggctggcggagagcgaactcttcggccatgtcaagggc
gccttcaccggcgccacccaggatcacaccggattgatccgcagcgccagcggcggcact
ctgttcctcgacgaaatcgccgacctgcctctcactctgcaggtcaaattgctccgcgtc
cttcaggaaggttccttgcgccccgtcggcgccaaaacggaaatttccgtcgacctgcgg
gtcatcagtgccacccatcaggacattcacgccctcaccgccgacggcaccttccgcgag
gatctttactatcgcctgcatgtcatcccgctgcgggtccccagcctgagcgaaagggcg
gaagacatcccgctgctggcccagcactttctggaccgcgagagtcagcgcatgaaccgg
gatatcctgggtttcagtcccgaggccctcgacaagctgatgcaacgatcctggcccggc
aacgtccgggaattggagaatgccgtcacctttgccgcggccgtcaccgaaaaaggctgg
gtcgccgccgacgccatccctgacaacggccgccagggtggccagagcgcctttcctccc
ctgcaggacgccaaggcggcctttgagcgcggctacctggaaaacctgctacgcgcgacg
gatggcaacatctcccgtgccgcacgcattgccggccgacaccggacggatctttacaag
ctgatgcgtaagcacagtctggctccgcaacttttcaagaatcccgaggaccgggatgag
gaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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