KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_0470
Entry
AFE_0470          CDS       T00810                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma-38 factor
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:afr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afr03021]
    AFE_0470 (rpoS)
Transcription machinery [BR:afr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFE_0470 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 HTH_23
Other DBs
NCBI-ProteinID: ACK79486
UniProt: B7J4L3
Position
410427..411380
AA seq 317 aa
MINAIGDEDEDGGFPDAPPISEQDEDAPEKIDGAEDFGEAPDWDATRCYLREIGHRPLLT
AEQEVTLGRMVQTGDQAARCTMIESNLRLVVKVARHYLNRGLPLLDLIEEGNLGLIRAVE
KFDPERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHVMKELSAVLRATRCLAQTLQRD
PTPEEVAEALDRSVDAVRDCLEMDGRVTSLDMPYGKGSDRSLADLVADTNAPGVEQRLEN
QNLSRQVHQWIATMTEKHRLVLLWRFGLDGTDGATLEEVGSRLGITRERVRQIQVEALLV
LRHRIEAEGLAPEGLFG
NT seq 954 nt   +upstreamnt  +downstreamnt
atgataaacgcgattggagacgaggatgaggacggggggtttcccgacgcacccccgatc
tcggaacaggacgaggatgctccggaaaagatcgatggagcggaggatttcggcgaggcg
cccgactgggatgccacccgctgttatcttcgggagatcggacaccgtccgctgctgaca
gcggagcaggaagtgaccctggggcgcatggtgcagactggtgatcaggccgcgcgctgc
accatgatagagagcaatctccgcctggtagtaaaggtggcgcgacactacctcaaccgg
ggcttgccacttctggacctgatcgaagagggcaacctcgggctgatccgagcggtggag
aaatttgatccggagcgcggctttcgcttctctacctatgcgacctggtggattcgtcag
aatatcgagcgggcgctgatgaatcagacccgcaccatccgtctgcccattcacgtgatg
aaggaactcagcgcggtgctgcgcgccacccgctgcctcgcacaaactctgcagcgggat
ccgacgccggaggaggtggcagaagctttggatcgctccgtcgacgcggttcgcgattgc
ctggaaatggatggccgggtgacgagcctggatatgccctatggcaaggggtcggatcgt
tccctggccgatctggtggcagacactaacgcgccaggcgtggagcagcggctggagaac
cagaatctttcccggcaggtgcaccagtggattgcgaccatgaccgaaaaacatcgcctc
gtgctgctctggcgcttcggtctggacggtacggacggcgcgacgttggaagaggtgggc
tcccgcctcggcatcacccgggagcgggtgcgccagattcaggtggaggcgttgctggtg
ttgcgccatcgcatcgaagcggaagggttggcacccgagggcctgttcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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