KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_1400
Entry
AFE_1400          CDS       T00810                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:afr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afr03019]
    AFE_1400 (rnc)
   03009 Ribosome biogenesis [BR:afr03009]
    AFE_1400 (rnc)
   03036 Chromosome and associated proteins [BR:afr03036]
    AFE_1400 (rnc)
Enzymes [BR:afr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AFE_1400 (rnc)
Messenger RNA biogenesis [BR:afr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AFE_1400 (rnc)
Ribosome biogenesis [BR:afr03009]
 Eukaryotic type
  90S particles
   RNase
    AFE_1400 (rnc)
 Prokaryotic type
  rRNA processing factors
   AFE_1400 (rnc)
Chromosome and associated proteins [BR:afr03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AFE_1400 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ACK78230
UniProt: B7J9K1
Position
1215071..1215751
AA seq 226 aa
MDVLESLQQSVGYQFREQSLLLQALTHRSAGARHNERLEFLGDAALNFVVAAKLFARFPK
VSEGDLSRMRARLVREETLAEIAGKIALADSLILGPGEIRSGGARRDSIRADALEAVIGA
AFLDGGFGAAERIVAQLVEPLMTDDLGGEELRDPKTRLQEFLQGQGRPVPVYTTVAEKGQ
AHERRFVARCSVPGAEATEAEDGSRRKAEQQAAALMLAQLQVAVHG
NT seq 681 nt   +upstreamnt  +downstreamnt
atggatgttttagaatctctgcaacagtcggtcggctatcaattccgtgagcagtccctg
ctgttgcaggcgctgacccatcgaagtgcgggcgcccggcacaatgaacggctggagttt
ctgggggacgcggcactgaattttgtagtagcggcaaaactcttcgcccgctttcccaag
gtgagcgagggggatctgtcgcggatgcgggcacggctggttcgggaggaaaccctggcg
gagatcgccggaaaaatcgctttggccgattccctgatcctgggccccggagaaatacgc
agcggtggcgcccggcgagactccatccgcgccgatgccttggaggcggtgattggtgcg
gctttcctggatggcggctttggtgcggcggagcgtatcgttgcacaactggtcgagccc
ttgatgactgatgacctgggtggcgaagagttgcgcgatcccaaaacgcgcctgcaggaa
ttcctgcagggacagggacgtcctgtacccgtctatacgacggtggcggaaaaaggacag
gcccatgagcggcgtttcgtggcgcgttgcagtgtgcctggcgccgaagctaccgaagcg
gaggatggcagccggcggaaagccgaacagcaggcggcggcgctgatgctggcacaactg
caggttgccgtgcatggatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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