KEGG   Actinoplanes friuliensis: AFR_10430
Entry
AFR_10430         CDS       T02892                                 
Name
(GenBank) putative DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
afs  Actinoplanes friuliensis
Pathway
afs03030  DNA replication
afs03410  Base excision repair
afs03420  Nucleotide excision repair
afs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AFR_10430
   03410 Base excision repair
    AFR_10430
   03420 Nucleotide excision repair
    AFR_10430
   03440 Homologous recombination
    AFR_10430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afs03032]
    AFR_10430
   03400 DNA repair and recombination proteins [BR:afs03400]
    AFR_10430
Enzymes [BR:afs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AFR_10430
DNA replication proteins [BR:afs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AFR_10430
DNA repair and recombination proteins [BR:afs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AFR_10430
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AFR_10430
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_pol_lambd_f HHH_5
Other DBs
NCBI-ProteinID: AGZ40375
UniProt: U5VXB9
Position
2258816..2261509
AA seq 897 aa
MSDDAQTPRLLLLDGHSLAYRAFFALPVENFSTQTGQPTNAVFGFTSMLINMLRDEKPTH
IVVAFDVSRVSFRTEKYADYKAGRAETPQPFQGQVSLVKEILEALRIPVVEKPGYEADDV
IGTLACQARDAGMEVVISTGDRDAFQLAGEHVTILYPVRGVSEVWRMTPEAIETKYGVPP
GRYRDKAALVGEASDNLPGVPGVGDKTAAKWINQYGGLEGIIAHVDEIKGKAGENLRAHL
ADVMRNYELNALVCDLELPLRPEDVKWQGWDREAVHQVFDALEFRVLRERLYSYLEAVEP
EAESGFDLSGTVLGVGEVAGWLTEHAREAPVGVAVTGRFGRGTGELTGIAVATGDGPAAW
FDPATLDESDERAVAAWLADADRPKVIHEAKPAMLAFRAHGWTLTGVRVDTALAAYLAKP
DQRAYDLTDLALRYLKRELRVDAPQDGQLTLDGLGEEEGTAEQNVMLRARATLDLADTIT
EELSRDDGASQRILAEVEQPLAIVLGEMEHVGIAADTEYLSELEAHFAAEVKSAQQGAHE
VVGREFNLGSPKQLQEILFTERGLPKTKKIKSGYTTDADALQSLFAQTGDPVLEHLLRHR
DVAKLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTDPNLQNIPIRTEEGRRIRRAF
VVGEGYEQLMTADYSQIEMRIMAHLSGDEALIAAFNSGADFHAATASSVFHVPVEEVVPD
QRRKIKAMNYGLAYGLSAFGLSNQLTITTEEARTLMDEYFQRFGGVRDYLQAVVRRAVQD
GYTATILGRRRYLPDLSSDNRQRREMAERMALNAPIQGSAADIIKIAMLNVDAALRASDL
TSRMLLQVHDELVFDVAPGERAALEELVRREMGGAYPLSVPLEVSVGVGQDWNGADH
NT seq 2694 nt   +upstreamnt  +downstreamnt
gtgagtgacgacgcccagaccccccgcttgctgctgctcgacgggcactcgctggcttat
cgcgcgttcttcgcgctgccggtggagaacttctcgacgcagacgggccagccgaccaac
gccgtgttcggcttcacctcgatgctgatcaacatgctgcgtgacgagaagcccacgcac
atcgtggtcgccttcgacgtctcgcgcgtgtcgttccgcaccgagaaatacgccgactac
aaggccggccgggccgagaccccgcagccgttccagggccaggtcagcctggtcaaggag
atcctcgaggcgctgcgcatccccgtcgtggaaaaacccggctacgaggccgacgacgtc
atcggcacgctcgcctgccaggcccgcgacgccggcatggaggtcgtcatctccaccggc
gaccgcgacgcgttccagctcgccggcgagcacgtcacgatcctctaccccgtccgcggc
gtctccgaggtctggcgcatgacccccgaggccatcgagacgaaatacggcgtcccgccc
ggccgctaccgcgacaaggccgccctggtcggcgaggccagcgacaacctccccggtgtc
cccggcgtcggcgacaagaccgccgccaagtggatcaatcagtacggcggactcgagggc
atcatcgcgcacgtcgacgagatcaagggcaaagcgggggagaacctccgcgcgcacctg
gccgacgtcatgcgcaactacgagctcaacgccctggtctgcgacctcgagctgccgctg
cgccccgaggacgtcaagtggcagggctgggaccgcgaggcggtgcaccaggtcttcgac
gcgctcgagttccgggtgctgcgggaacggctgtattcgtacctggaggcggtcgagccc
gaggccgagtccggcttcgacctgtccggcaccgtcctgggcgtcggcgaggtcgccggc
tggctcaccgagcacgcccgcgaggcccccgtcggcgtcgccgtcaccggccgcttcggc
cgcggcaccggcgagctgaccggcatcgccgtcgcgaccggcgacggccccgccgcctgg
ttcgaccccgcgaccctcgacgagagcgacgaacgcgccgtcgcagcctggctcgccgac
gccgaccggccgaaggtcatccacgaggccaagccggcgatgctggcgttccgcgcccac
ggctggaccctcaccggtgtccgcgtcgacacggccctcgcggcctacctcgccaaaccc
gaccagcgggcgtacgacctgaccgacctggccctgcgctacctcaaacgcgagctgcgc
gtcgacgccccccaggacggccagctcaccctcgacggcctcggcgaggaggaaggcacg
gccgagcagaacgtcatgctccgcgcccgcgccaccctcgacctcgccgacaccatcacc
gaggagctctcccgcgacgacggcgcctcccagcgcatcctggccgaggtcgagcagccg
ctggcgatcgtgctcggcgagatggaacacgtcggcatcgccgccgacaccgaatacctg
tcggagctcgaggcccacttcgccgccgaggtgaaatcggcccagcagggcgcccacgag
gtcgtcggccgcgagttcaacctgggctcacccaagcagctccaggagatcctcttcacc
gaacgcggcctgcccaagaccaagaagatcaagtccggctacacgacggacgccgacgcc
ctgcagagcctcttcgcccagaccggcgaccccgtcctcgagcacctgctgcgccaccgc
gacgtcgccaagctcaagtccaccgtggacggcctgctcaagtcggtctccgacgacggc
cgcatccacaccacgttcaaccagacggtcgccgccaccggccgcctgtcgtcgaccgac
cccaacctgcagaacatccccatccgcaccgaggaaggccgccgcatccgccgcgccttc
gtcgtcggcgagggctacgagcagctgatgacggccgactacagccagatcgagatgcgc
atcatggcgcacctctccggcgacgaagccctcatcgccgccttcaactccggcgccgac
ttccacgccgcgacggcctcgtcggtcttccacgtcccggtcgaagaggtcgtccccgac
cagcgccgcaaaatcaaggcgatgaactacggcctggcctacggcctcagcgccttcggc
ctctccaaccagctcaccatcaccaccgaagaagcccgcaccctcatggacgagtacttc
caacgttttggaggcgtccgcgactacctccaggccgtcgtccgccgcgccgtccaggac
ggctacaccgccaccatcctcggccgccgccgctacctgccggacctgagcagcgacaac
cgccagcgccgcgaaatggccgaacgcatggctctcaacgcccccatccagggctcagcc
gccgacatcatcaaaatcgccatgctcaacgtcgacgccgccctccgcgcctccgacctc
acgtctcgcatgctcctccaggtccatgacgaactggtcttcgacgtcgccccgggcgag
cgtgctgctctcgaagagctggtgcgccgggagatgggcggggcttaccccctgtccgta
ccgctcgaggtctcggtcggcgtcggccaggactggaacggggccgatcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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