KEGG   Agrobacterium sp. RAC06: BSY240_2683
Entry
BSY240_2683       CDS       T04501                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc03030  DNA replication
agc03430  Mismatch repair
agc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSY240_2683 (dnaX)
   03430 Mismatch repair
    BSY240_2683 (dnaX)
   03440 Homologous recombination
    BSY240_2683 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agc03032]
    BSY240_2683 (dnaX)
   03400 DNA repair and recombination proteins [BR:agc03400]
    BSY240_2683 (dnaX)
Enzymes [BR:agc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSY240_2683 (dnaX)
DNA replication proteins [BR:agc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSY240_2683 (dnaX)
DNA repair and recombination proteins [BR:agc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSY240_2683 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA AAA_22 AAA_16 AAA_30 AAA_5 AAA_14 AAA_19 AAA_24 RuvB_N AAA_18 AAA_assoc_2 TsaE SKI SRP54 DUF815 Rad17 CbiA nSTAND3 RNA_helicase AAA_17 AAA_28 AAA_2 AAA_7
Other DBs
NCBI-ProteinID: AOG09005
UniProt: A0A1B3NUJ6
Position
2739870..2741750
AA seq 626 aa
MSDFEPTAEAKPAPGGYRVLARKYRPKDFTDLMVGQEPMVRTLTNAFETGRIAQAYMLTG
VRGVGKTTTARILARALNYKTAEIDKPTIDLRVPGEHCQAIMEGRHVDVIEMDAASHTGI
DDIREIIEQVRYRPVSARYKVYIIDEVHMLSTAAFNGLLKTLEEPPEHVKFIFATTEIRK
VPITVLSRCQRFDLRRISAGDLVGLFSTIASKEGIEADEDALAMIARAAEGSARDGLSLL
DQAIAHGSGVVHADAVRSMLGLADRARIVDLFDHIVRGDVAAALSEFGSQYEAGANPTVV
LTDLADFTHLVTRLKYIPSAAQDPSLSEVERVRGADLAENVAVTTLSRMWQMLLKGIPEA
EASSRPAGAAEMVLIRLAHAAHLPSPEDAARRLLELSNGEGGGDRAPSAPRPNGGGGGAS
MAMRVQAVGQPSQDSAPRPAMSQPVAHLQSVPAGDALPQAMERREAKAEEAPVPGVRVET
LDDIADLCTKNRAPVLRAQLRQFVHLVKIEPGRLEIRLESQCPPGIVNELKMKLSEWTGI
TWWVTLSNEAGAPTLVEVEKTTREARLVDARQDPDVAAILARFPGAKVTDVRIKAAAIED
DDIVAAPPAAAESAEGDILPGDDIEF
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagcgatttcgagccgactgcagaggccaagcccgcccccggcggctaccgcgttctc
gcccgcaaatatcgcccaaaggatttcacggacctgatggtcggccaggagccgatggta
cgaacgctgacaaatgcgttcgaaaccggccgcatcgcccaggcctatatgctgaccggc
gtgcgcggggtgggcaagacgaccacggcccgtattctggcgcgtgcactgaattacaag
accgctgagatcgacaagccgacgatcgaccttcgcgtccccggcgaacattgccaggcg
atcatggaaggccggcatgtcgacgtgatcgagatggatgcggcatcgcataccggtatc
gacgatatcagagagatcatcgagcaggtgcgctaccgcccggtttcggcgcgctacaag
gtctacatcatcgacgaagtgcacatgctgtcgacggcggccttcaacgggctgctgaag
acgctcgaagagccgccggagcatgtgaagttcattttcgcgacgaccgaaatccgcaag
gtcccgatcaccgtgctctcccgctgccagcgcttcgacctgcgccgcatcagtgcgggg
gatcttgtcgggctgttttcgaccattgcgtcgaaggaaggcatcgaggcggacgaagac
gcgctggcgatgattgcgcgtgctgcagaaggctcggcacgtgacgggctctcgctgctc
gaccaggcgatcgcccacggcagcggcgtggtgcatgccgatgccgtgcgttccatgctg
ggtcttgcagaccgggcccgtatcgtcgaccttttcgaccatatcgtgcgcggtgatgtg
gcagcagccctttccgaattcggcagccagtatgaggcgggtgccaacccgaccgtggtg
ctgaccgatcttgccgatttcacccatctggtgacccggctcaaatacattccctcagcc
gcacaggatccctcgctttccgaagtcgagcgcgtgcgcggcgccgacctcgcagagaac
gtggcagtgacgacgctgtcgcgcatgtggcagatgctgctcaagggcatcccggaagcg
gaggcctcgtcgcgaccggcaggtgctgccgagatggtgctgatccggcttgcgcatgcc
gcccatctgccctcgcccgaagatgctgcgcgacgcctgctcgaattgtcgaatggtgaa
ggtggcggagatcgcgcgccttctgcgccgcggccgaatggcggcggcggtggggcctcg
atggcgatgcgcgtgcaggccgtgggccaaccctcgcaggatagcgccccgcgcccggca
atgagccaaccggttgcgcatctgcagagtgtgccggctggtgatgcgctgccgcaagcg
atggagcggcgggaagccaaggccgaggaagcgccggtcccgggcgttcgcgttgagaca
ctcgacgatatcgctgatctctgcaccaagaaccgggcgcccgtgttgcgggctcagctt
cgtcagttcgtgcatcttgtgaagatcgagccgggccggctggagattcgcctcgaatcg
caatgcccgcctggtatcgtcaacgagctgaagatgaagctcagcgagtggaccggcatc
acctggtgggtgacgctgtccaacgaggcgggcgcgccgactctggtcgaagtcgaaaag
acgacgcgcgaagcgcggctagtcgatgcgcggcaggacccggatgtcgcggcgatcctc
gcacgctttcccggcgccaaggtgaccgacgtgcggatcaaggcagctgcgatcgaggac
gacgacatcgtggcggcaccgccggcagcagccgaatccgccgagggcgacatcctgccg
ggcgacgacatcgaattctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (39)   

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