KEGG   Agrobacterium sp. RAC06: BSY240_3562
Entry
BSY240_3562       CDS       T04501                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc00010  Glycolysis / Gluconeogenesis
agc00020  Citrate cycle (TCA cycle)
agc00260  Glycine, serine and threonine metabolism
agc00280  Valine, leucine and isoleucine degradation
agc00310  Lysine degradation
agc00380  Tryptophan metabolism
agc00620  Pyruvate metabolism
agc00630  Glyoxylate and dicarboxylate metabolism
agc00640  Propanoate metabolism
agc00785  Lipoic acid metabolism
agc01100  Metabolic pathways
agc01110  Biosynthesis of secondary metabolites
agc01120  Microbial metabolism in diverse environments
agc01200  Carbon metabolism
agc01210  2-Oxocarboxylic acid metabolism
agc01240  Biosynthesis of cofactors
Module
agc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
agc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
agc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:agc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BSY240_3562 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BSY240_3562 (lpdA)
   00620 Pyruvate metabolism
    BSY240_3562 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BSY240_3562 (lpdA)
   00640 Propanoate metabolism
    BSY240_3562 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSY240_3562 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BSY240_3562 (lpdA)
   00310 Lysine degradation
    BSY240_3562 (lpdA)
   00380 Tryptophan metabolism
    BSY240_3562 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BSY240_3562 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:agc04147]
    BSY240_3562 (lpdA)
Enzymes [BR:agc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BSY240_3562 (lpdA)
Exosome [BR:agc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BSY240_3562 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like NAD_binding_8 GIDA FAD_oxidored FAD_binding_3 FAD_binding_2 UDPG_MGDP_dh_N AlaDh_PNT_C NAD_binding_7 BPL_C 3HCDH_N NAD_binding_9
Other DBs
NCBI-ProteinID: AOG09856
UniProt: A0A1B3NWX5
Position
complement(3704987..3706381)
AA seq 464 aa
MKEISCKLLIIGAGPGGYVCAIKAGQLGIDTVIVEEGRPGGTCLTVGCIPSKALIHAAET
FDKTRALSLGENALGIRVEAPSIDLSKTMAWKDAIVGRLTGGVSGLLQKARVKIVHGRAR
FRDGKTVEVSTETGQQVIRAETVVIATGSDSVELTALPFGGRVISSTEALSLTELPKRLV
VVGGGYIGLELGTAFARMGSEVTVVEATSQILPLYDADLVKPVLRRLGERGIKVLTEARA
VGLSDTGEALVVETAEGRRELPADRILVAVGRRPRTTGSGLEELDLDRIGSFLQVDDRCH
TSMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGRKRAWDKRCIPAICFTDPEIVSAGL
LPEEARRHGFDVKIGQFPFTANGRAMTVEDEDGFVRVVARSDTHVVLGLQAVGAGVSELA
STFAMAIEMGARLEDIAATIHAHPTRGEALQEASLRALGHALHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagagatttcctgcaagcttctcataatcggtgccggtcccgggggctatgtctgc
gccatcaaggcaggacagcttgggattgataccgtcatcgttgaggaaggccgccccggt
ggcacctgtctgacggtcggctgcattccttcgaaggcgctcatccatgcggcggagacc
ttcgacaagacccgcgccctctccctcggcgagaacgcccttggcattcgcgtcgaggca
ccttcgatcgatctgtccaaaaccatggcctggaaggacgcgattgtcggcagactgacc
ggtggtgtctccggcctcctgcagaaggctcgggttaagatcgttcatggccgcgcccgt
tttcgtgacggcaagaccgtggaagtgtccacggaaaccggccagcaggtcatccgcgcc
gaaaccgtggtgattgcgaccggctctgattccgtcgagcttacagccctgccgtttggc
gggcgagtgatttcctccaccgaagccttgtcgctgaccgaactgcccaaacggctcgtc
gtcgtgggcggcggctatatcgggctcgaactcggaacggccttcgcccggatggggtcc
gaggtcaccgtggttgaggcgacatcgcagatcctgccgctctacgatgccgatctggtc
aaaccggttctgcgcaggctgggcgaacgcggcatcaaggtgctgacggaggcaagggcc
gtcgggctttccgacacgggcgaggcgctggtcgtcgagaccgcagagggacggcgcgag
ctgccggccgatcgcattctggtcgctgtcgggcgacggccgcgcaccacgggttctggc
ctggaagaactcgatctcgaccggatcggttcgttcctgcaggtcgatgaccgctgccac
acatccatgcgcggggtttacgcgatcggcgacgtgacaggcgagcccatgctggcgcat
cgggccatggcgcagggcgaaatggtcgcggagatcgttgccggccgcaagcgcgcctgg
gacaagcgctgcattccggccatctgcttcaccgatccggaaatcgtcagcgccggcctc
ttaccggaggaagcccgcagacacggcttcgatgtcaagatcggccagttccccttcacc
gcaaacggacgggcgatgacggtggaggatgaagatggtttcgtacgcgtcgtcgcgcgg
tccgatacccatgtcgtgctggggcttcaggcggttggagcgggcgtctccgaacttgcc
tcgaccttcgcaatggccatcgaaatgggcgcgcggctggaggatatcgccgcgaccatc
catgcacacccgacacgcggcgaagccctgcaggaagcctctctgagggccttgggacac
gcgctgcatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (86)   

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