KEGG   Agrobacterium sp. RAC06: BSY240_862
Entry
BSY240_862        CDS       T04501                                 
Symbol
secD
Name
(GenBank) export membrane protein SecD
  KO
K12257  SecD/SecF fusion protein
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc02024  Quorum sensing
agc03060  Protein export
agc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:agc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BSY240_862 (secD)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BSY240_862 (secD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BSY240_862 (secD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:agc02044]
    BSY240_862 (secD)
Secretion system [BR:agc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BSY240_862 (secD)
SSDB
Motif
Pfam: SecD_SecF SecD_1st Sec_GG MMPL SecD-TM1 SpecificRecomb
Other DBs
NCBI-ProteinID: AOG12337
UniProt: A0A1B3P419
Position
complement(897978..900530)
AA seq 850 aa
MLYISRWKTLFIWLTVALGVLVALPNAFTDEELEAFPSWFPTSKVTLGLDLQGGSHIMLR
LEREDIVKERLETIVGDVRTQLREAGIRYTGLSGVGQQIQVRITDADKVPEAIEALRSLT
DPVSIGGLTGGSVTEVALEQAEGGVLRLTLTDAGIDYRVSSALTQSMEVVRRRVDELGTT
EPLIQRQGDDRIIVQVPGLTDPQRLKALLNQTAKLSFHMVDTTMPVTEAMNTRPPAQSEI
LYSADDPAVPYLIERRALISGENLVDAQAAFDQRTNEPVVSFRFDSRGAQRFAQATQENV
GNPFAIVLDQQVISAPVIREPILGGSGQISGNFSVEGANDLAVLLRAGALPATLTVVEER
TVGPGLGQDSINAGVTASIIGGIAVVLFMLAFYGTFGVMANIALAANIALILAALSMIGS
TLTLPGIAGIVLTMGMAVDSNVLIYERIREEARNGRPLVQAIEVGFKKAFATIIDANLTT
LIAAVVLFFLGSGPVRGFAVTLSIGIVTTVFTAFTLTFWLMAFWYRWKRPKHIPKSVRTG
FFDNRNIRFMAARKFNFGLAMLISVASLVGFATVGMNLGIDFKGGSIIEVQARDGTADLS
DIRDRLSQLNLGEVQAQGFGDDASALIRLQAQDGGENAEQSALSKVRGELEAEYDFRRVE
VVGPSVSSDLTYSATIGVAAALFGILIYIWFRFEWQFALGAIIATLHDVVFTLGLFVLTG
IEFNLTSIAAILTIIGYSLNDTVVVYDRMRENLRRYKKMPLEVLIDESINQTLSRTVLTA
GSTVLALGALYLFGGEVIASFTFAMLAGVLIGTFSSIYIAGPVLIAFKLRPENFQRDETE
GEQVPAKAGA
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgctttacatttcccgctggaagacattgttcatctggttgaccgttgcgctcggcgtc
cttgtcgccctgcccaatgccttcacggacgaggaactggaagcattcccctcctggttc
cccacgagcaaggtgacgctcggcctcgacctgcagggcggctcgcacatcatgctgagg
ctcgagcgcgaggatatcgtcaaggaacgccttgagacgatcgtcggcgacgtccggacc
cagcttcgcgaagccggcatccgctatacgggcctttccggcgtcggccagcagatccag
gttcgcattaccgatgcggacaaggtgccggaagcaatcgaagcgctgcgctcgctgacc
gatcccgtcagcatcggcggtctgaccggcggttctgtgacggaggttgctctcgagcag
gccgagggcggcgtgctgcgcctgacgctgaccgacgcgggcatcgactaccgcgtatcc
tctgccctgacgcagtcgatggaagtcgttcgccgccgtgtcgacgaattggggacgacc
gaaccgctcatccagcgccagggggatgaccgcatcatcgtccaggtcccgggcctgact
gatccgcagcgcctgaaagcgcttctgaaccagacggccaaactgtccttccacatggtc
gacacgacgatgccggtcacagaagcgatgaacacgcgtccgcctgcacagtcggagatc
ctttattcggccgatgacccggccgttccctatctcatcgagcgtcgtgcgctgatctcg
ggtgaaaacctcgttgatgcccaggcagcctttgaccagcgcaccaatgagccggtcgtc
agcttccgcttcgacagccgcggtgcccagcgttttgcccaggcaacgcaggaaaacgtc
ggcaatcccttcgccatcgtcctcgaccagcaggtcatttccgcgcccgtcatccgcgag
ccgatcctcggcggttccggacagatctccggcaatttctcggtcgaaggcgcaaacgat
cttgcggttctgctgcgtgccggtgctctgccggcgacgctgacggtcgtcgaggaacgc
accgtaggccccggcctcggccaggattcgatcaatgccggcgtgaccgccagcatcatt
ggcggcatcgcggtcgttctcttcatgctcgccttctatggcaccttcggcgtgatggcg
aacatcgcgctcgcggccaatattgccctgatcctcgcggccctgtcgatgatcgggtcg
acgctgaccttgccgggtatcgccggtatcgttctgacaatgggtatggccgtcgactcg
aacgtcctgatctatgagcgcattcgcgaggaggcccgcaatggccgacccttggtgcag
gcgatcgaggtcggtttcaagaaggcctttgcgaccatcatcgacgcgaacctcacgacg
ttgatcgcggccgtcgttctcttcttcctcgggtccggcccagtgcgtggcttcgccgtc
accctgtcgatcggtatcgtgacgaccgtctttactgccttcaccctgaccttctggttg
atggccttctggtaccgctggaagcgcccgaagcacattccgaaaagcgtacgcactggt
ttcttcgacaaccgcaacattcgcttcatggcggcccgcaagttcaatttcggactggcc
atgctcatctcggttgcctccctggtcgggtttgcgaccgttggcatgaacctcgggatc
gacttcaagggtggctccatcatcgaggtgcaggcacgtgacggaaccgccgatctctcc
gatatccgcgaccgtctgagccagctgaacctcggcgaggtgcaggcgcagggcttcggc
gacgatgccagcgcgcttatccgtctccaggcgcaggatggcggcgagaacgccgaacag
tcggctctcagcaaggttcgtggtgaactggaggccgaatacgactttcgccgtgtcgag
gtggtcggaccatcggtctcgagcgacctgacctattcggcgacgatcggcgttgcggca
gctctcttcggcatcctgatctacatctggttccgtttcgagtggcagttcgcgctaggc
gcaatcatcgccaccctgcacgacgttgtcttcacgctcggcctgttcgtcctgactggc
attgaattcaacctgacgagtatcgcggcgatcctgacgatcatcggctactcgctgaac
gatacggtcgtcgtttatgaccgcatgcgagaaaacctcaggcgatacaagaagatgccg
cttgaggtgttgatcgacgaatcgatcaaccagacgctctcgcgtacggttctgaccgcc
ggcagtacggtcctcgctcttggggcgctctatctgttcggcggggaagtcattgcctcc
ttcaccttcgccatgctggcaggcgttctgatcggaaccttctcgtcgatctacatcgct
ggcccggttctgatcgccttcaagctgcgtccggaaaacttccagcgggacgagaccgag
ggcgagcaggttccggccaaggccggggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system