KEGG   Agrococcus sp. SGAir0287: C1N71_11880
Entry
C1N71_11880       CDS       T05973                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
agg  Agrococcus sp. SGAir0287
Pathway
agg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:agg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    C1N71_11880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agg03021]
    C1N71_11880
   03400 DNA repair and recombination proteins [BR:agg03400]
    C1N71_11880
Enzymes [BR:agg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     C1N71_11880
Transcription machinery [BR:agg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     C1N71_11880
DNA repair and recombination proteins [BR:agg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      C1N71_11880
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: QCR20049
UniProt: A0A4P8RCK3
Position
complement(2498040..2499029)
AA seq 329 aa
MLIAQRPTVSEEVISEHRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTGIRIDGVL
HEFTTIQGVKEDVTEIILNLKGLVVSSEHDEPIVAYLSKQGAGSVTAADITAPAGVEIHN
PELVIATLNDKAKFQLELTIERGRGYVSAAQNRDEFAEAGSIPIDSIYSPVLKVTYRVEA
TRAGERTDFDSLVVDVETKPAITPRDAVASAGRTLVELFGLTRDLNAAAEGIEIGPAPAV
EQLSGELGTPIEELDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LTELGLSLKDAVPGFDGAHFYGYDDEEAL
NT seq 990 nt   +upstreamnt  +downstreamnt
gtgctgatcgcccagcgcccgaccgtctccgaagaggtcatctcggagcaccgctcgcgg
ttcaccatcgagccgctcgagcccggattcgggtacaccctcggcaactccctccgccgc
acgctcctctcgtcgatccccggtgccgccgtcacgggcatccgcatcgacggcgtgctc
cacgagttcacgaccatccagggcgtgaaggaggacgtgaccgagatcatcctcaacctc
aagggactcgtcgtctcgtccgagcacgacgagccgatcgtcgcctacctgtcgaagcag
ggtgccggcagcgtcaccgccgccgacatcacggctcccgccggcgtcgagatccacaac
cccgagctcgtcatcgccacgctcaacgacaaggcgaagttccagctcgagctcacgatc
gagcgcggccgcggctacgtgtcggctgcgcagaaccgcgacgagttcgccgaggcgggc
tcgatcccgatcgactcgatctactcgcccgtgctcaaggtcacctaccgcgtcgaggcg
acgcgtgccggtgagcgcacggacttcgactcgctcgtcgtcgacgtcgagacgaagccg
gcgatcacgccgcgcgacgccgtcgcgtcggccggccggacgctcgtcgagctcttcggc
ctcacgcgcgacctcaacgccgccgccgagggcatcgagatcggccccgcgccggccgtc
gagcagctctcgggcgagctcggcacgccgatcgaggagctcgacctgtcggtccgctcg
tacaactgcctcaagcgcgagggcatcaacacggtgtccgagctcgtggcgctgagcgag
acgcagctcatgaacatccgcaacttcggccagaagtccgtcgacgaggtcaaggacaag
ctcaccgagctcggcctctcgctcaaggacgcggtgcccggcttcgacggcgcccacttc
tacggctacgacgacgaggaagccctctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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