KEGG   Akkermansia glycaniphila: PYTT_2553
Entry
PYTT_2553         CDS       T04551                                 
Name
(GenBank) rpon sigma: rna polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
agl  Akkermansia glycaniphila
Pathway
agl02020  Two-component system
agl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:agl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PYTT_2553
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PYTT_2553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agl03021]
    PYTT_2553
Transcription machinery [BR:agl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PYTT_2553
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 HTH_IclR Fe_dep_repress
Other DBs
NCBI-ProteinID: SEI01248
UniProt: A0A1H6MHZ0
Position
I:3026686..3028023
AA seq 445 aa
MSHAGMQQGMKQSMVAGASMQLFMRTLQASSMELSQIVQQAMAANPVLEEDTPREDPRHD
DDGWEASSPSDGTAAAERHELLMNSLSEELSLTEHLEEQVARSGIAPPIARAALDLIGEL
DHRGFFEDSPEEIAVRNGIAPKILEEALGIVQDLDPPGVGARDLRDSLLIQLRQAGEEDS
LPGRLLRDCWDDLVRHRYADASRTLGADEDEIQAAVQRITRLNPDPGAGFAREANPSVTP
DLIVEKGKNGGLHVSLTGEHIPKLSISSAYREMLSEHAEDAELRAYLSRCFREGREFIKS
ITDRQETILTIAREIVRRQEPFFLEGKDHLAPMRMEDVAHALEIHPSTVSRAVSHKYLLC
SHGIYELRSFFQTALPQHDGDGDALSPQAIQARIRKLVDEENPAKPLSDAKIEAALAAQG
VTVARRTIAKYRDQMKILPASLRKR
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagtcatgcgggcatgcagcagggaatgaagcagtccatggtggcgggagcctccatg
cagctcttcatgcgcaccctgcaggcttcatccatggagttgtcgcagatcgtgcaacag
gccatggcggccaatcccgtgttggaggaagatacgccccgcgaggatccccggcacgat
gacgacggctgggaagcatcgtccccttcggacggtacagccgctgccgaacgccacgag
ttgctcatgaattcgctcagcgaagaactttccctgaccgagcatcttgaagaacaggtc
gcccgttcaggcatcgctcccccgatcgcacgggcggctctggatttgatcggcgagctg
gaccatcggggctttttcgaagacagccctgaagagatagccgtccgcaacggcattgcc
ccgaaaattctggaggaagcccttggcatcgtgcaggatctcgaccctccgggcgtcggg
gcgcgcgatctgcgggattccctgttgatccagctccggcaggctggggaggaggattcc
ctgcccggccgccttctgcgtgactgctgggatgatctggtacgccaccgctatgcggat
gcctcacgcaccctcggcgcggacgaggacgagatacaggctgccgtacagcgcatcact
cgcctgaaccccgatccgggagcaggcttcgcccgcgaggcgaacccgtccgtcacgccc
gacctgatcgtcgaaaaaggcaagaacggcggcttgcacgtctccctgacgggcgaacac
attccgaaactctccatcagcagcgcctaccgcgagatgttgtccgaacatgccgaggat
gcggaactgcgtgcctacctaagccgctgtttccgggaagggcgcgagttcatcaaatcc
atcaccgacaggcaggaaaccattctgacgatcgcccgggaaatcgtccggcggcaggaa
cccttcttcctcgaagggaaggaccatctcgccccgatgcgaatggaagacgtggcgcat
gcactggagattcatccctccaccgtctcccgcgccgtcagccacaaatacctgttgtgc
agccacggcatctacgaactgcgctcgttcttccagactgcgctgccgcagcacgacgga
gacggcgacgcgctcagcccgcaggccattcaggcgcgcatcaggaagctcgtcgacgag
gagaatcccgccaagcccctgagcgatgccaagatagaagccgccctcgcagcgcaaggc
gttaccgtggcgcggcgaaccatcgccaagtaccgcgaccagatgaaaatccttccggcc
agccttcgcaagcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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