KEGG   Anoxybacillus gonensis: AFK25_00880
Entry
AFK25_00880       CDS       T04000                                 
Name
(GenBank) RNA polymerase sigma factor SigW
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
agn  Anoxybacillus gonensis
Brite
KEGG Orthology (KO) [BR:agn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agn03021]
    AFK25_00880
Transcription machinery [BR:agn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK25_00880
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16 HTH_23 DUF1492 HTH_24 UPF0122
Other DBs
NCBI-ProteinID: AKS37156
Position
150404..150967
AA seq 187 aa
MDMFIKQRIKAIKKGDQSAFADIVEMYKDKIYQLCYRMLGNRHEAEDAAQEAFIRAYVNI
HTYDPTMKFSSWLYRIATNLSIDRMRKKKPDVYLDAEVSGTDGLTMYSQLADEGASPEDA
LESLELQQMVQEAILKLPEKYRTVIVLKYIDELSLQEISDILNLPIGTVKTRIHRGREAL
RKHLGHL
NT seq 564 nt   +upstreamnt  +downstreamnt
atggacatgtttattaaacaacgcattaaagcgattaaaaaaggagatcaaagcgcgttt
gcagatattgtcgaaatgtacaaggataaaatttatcaactgtgctatcgcatgttagga
aatcgtcatgaagcagaagatgctgcacaagaagcgttcattcgggcgtatgtcaacatt
catacatacgatccgacaatgaagttttcttcttggttatatcgcattgcgacgaattta
tcgattgatcgcatgcgtaaaaaaaagcccgatgtttatttagatgcagaagtgtcaggg
acagacggattaacgatgtactcgcagcttgcagatgaaggagcttctccggaagatgcg
ttagaaagcttagagttacaacaaatggtacaagaagcgattttaaagctaccagaaaaa
tatcgcactgtcatcgtcttaaaatatattgacgagctatcactgcaagaaattagtgac
attttaaatttgccaattggtacagtgaaaacgcgtattcatcgtggtcgtgaagcattg
cgtaaacatttaggccatttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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