KEGG   Anoxybacillus gonensis: AFK25_05405
Entry
AFK25_05405       CDS       T04000                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
agn  Anoxybacillus gonensis
Pathway
agn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:agn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AFK25_05405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agn03021]
    AFK25_05405
   03400 DNA repair and recombination proteins [BR:agn03400]
    AFK25_05405
Enzymes [BR:agn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AFK25_05405
Transcription machinery [BR:agn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AFK25_05405
DNA repair and recombination proteins [BR:agn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AFK25_05405
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AKS37992
Position
1010059..1010268
AA seq 69 aa
MLYPSIDLLITKLDSKYTLVTVAAKRARQLQVKNDLTIEKPVSKKFVGKALEEIAAGHIE
VVSEEEATQ
NT seq 210 nt   +upstreamnt  +downstreamnt
atgttatatccttccattgatttgctcattacaaaactcgattcaaaatatacgctcgtc
acagttgcggcaaagcgcgcccgccaattgcaagtgaaaaatgacttaacgatcgaaaaa
cctgtgtcgaaaaaatttgtcggcaaagcgttagaagaaattgcggcgggtcatattgaa
gtcgttagcgaagaagaagcaacgcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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