KEGG   Ashbya gossypii (Eremothecium gossypii): AGOS_ACR172W
Entry
AGOS_ACR172W      CDS       T00167                                 
Name
(RefSeq) ACR172Wp
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ago  Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ago00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGOS_ACR172W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ago03019]
    AGOS_ACR172W
Messenger RNA biogenesis [BR:ago03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AGOS_ACR172W
  mRNA degradation factors
   3'-5' decay
    Pan complex
     AGOS_ACR172W
SSDB
Motif
Pfam: Pan3_PK
Other DBs
NCBI-GeneID: 4619706
NCBI-ProteinID: NP_983574
UniProt: Q75BU9
Position
III:655569..657407
AA seq 612 aa
MMMNKSKTDWAKDTPCKNITIYGYCKYENDGCIFNHGKPLSTSSNTGGAAAGSAEDSAAS
GGVTVGNTGKSTFNAKTATSFTPSVAIPDFNNIPSFTPERIVSSPAGDGATAFTPSFNPY
GSDSFNPSANVSGPGSAVFAAASGNAGASATAAPRSQSVHVGTGGYLPLAGTAFPTVYPP
SHSILQYHLYAPDPPPHLQVPLKANERTPETLFIPNNLREHLLKRNLSALQVFPSDGNLP
DIVGDYFGLVPLEFHNRQTGKGRYLGHQNSLYKVFSNFDGKVYIIRRIHDVKTTDVGQIS
LPFRKWQKVSCPNVVKVKDAFTTLAFGDSSLCVVHDYYPQSNSLYETHVANYTVVPVTQK
YLWSYLVQLSNALNEVHRHGLSMNNISLDKVIVTGDPGRIKVGDSAVHDILAFDEGRDIA
KEQQADYSAVGALLMDLAQRMLGTRDQPLDSMDIDPLFKRVLAYLLSDEKKTIAEFTALF
SHKMLDIISSSQTYSEYIEQHLSRELENGRLFRLMCKLNFIFGRMESSMDIHWSEAGDKF
PIILFYDYVFHQVDENGKSVMDLTHVLRCLNKLDTGVSEKIILVTPDEMNCIIISYKELK
DSIDSTFRSMTQ
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgatgatgaacaagtccaagaccgactgggccaaagacacgccctgcaaaaacatcacg
atatatgggtactgcaagtacgaaaacgatggctgcatcttcaaccacgggaagccgttg
tcgacgtcgtcgaacaccgggggcgcggcggcggggtctgcggaggactccgcggcgtcc
gggggcgtgacggtaggcaacacgggcaagtcgacgttcaatgccaagacggcgacgagc
ttcacgccgtcggtggccatccccgacttcaacaacatcccgagcttcacgccggagcgc
atagtgtcgtcaccggcgggagacggggcgacggcgttcacaccgagcttcaacccctac
gggtcggacagcttcaatccgtcggcgaatgtgtcggggccggggtctgcggtgttcgcc
gcggcgtccggcaacgcgggcgcgtcggcgacagcggcgccgcggtcgcagtcggtgcac
gtcgggacgggcggctacctgccgctggctggcacggcgttccccacggtgtacccgcct
tcgcactcgatcctgcagtaccacctgtacgcgccggacccgccgccgcacctgcaggtg
ccgttgaaggcgaacgagcggacgcctgaaacgctgttcatcccgaacaacctgcgggag
cacctgctgaagcggaacctgtctgcgctgcaggtgtttccgtcggacgggaacctgccc
gacatcgtgggcgactacttcgggctggtgccgctggagttccacaaccggcagaccggg
aagggccgctacctggggcaccaaaactctctgtacaaggtgttctctaacttcgacggg
aaggtgtacatcatccggcgcatccacgatgtgaagacgaccgacgttgggcagatttcg
ctgccgttccgcaagtggcagaaggtgagctgtcccaacgtcgtgaaggtgaaggacgcc
ttcaccacgctcgcgttcggcgactcgtcgctctgcgtggtgcacgactactacccccag
tcgaactctctgtacgagacacacgttgccaattatactgtcgtgccggttacccagaag
tacttgtggagctatctcgtgcagctctcgaacgcgcttaacgaggtccaccgccacggc
ttgtcgatgaacaacataagcctggacaaggtcatagtcaccggcgaccccgggcgcatc
aaggtcggggactccgccgtgcacgacatcctggcgttcgacgagggccgggacatcgcc
aaggaacagcaggccgactacagcgctgtcggcgcgctgctcatggacctagcccagcgc
atgctgggcacgagggaccagccgctggatagcatggacatcgacccgctgttcaagcgg
gtgctggcgtaccttttgtcggacgagaagaagacgattgcggagttcaccgccctgttc
agccacaagatgctagacataatcagttcgtcgcagacctactcggagtacatcgagcag
cacttgtcgcgggagttagagaatggcaggctcttcaggctcatgtgcaagctaaatttc
atctttggtaggatggaatccagcatggacatccactggtctgaggcgggggacaagttc
cccatcattctgttctacgattacgtgttccaccaggtggacgagaacggcaaatccgtg
atggacctcacccacgtactccggtgcctgaacaaactcgacaccggcgtatctgaaaag
ataatcttggtgacaccggacgagatgaactgcattatcattagctacaaggagctgaag
gattctatcgactcgacatttagatcaatgacacaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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