KEGG   Agrobacterium tumefaciens H13-3: AGROH133_13038
Entry
AGROH133_13038    CDS       T01432                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
agr  Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:agr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agr03021]
    AGROH133_13038
Transcription machinery [BR:agr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AGROH133_13038
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF ADSL_C HTH_23
Other DBs
NCBI-ProteinID: ADY67253
Position
linear:complement(1662750..1663316)
AA seq 188 aa
MAKEPEQTEYNFKREMLAALPNLRAFAISLIRSRDRADDLVQDTIMKAWAKQESFQPGTN
MRAWLVTILRNEFYSQIRKSGREVQDTDGVYTSRLSVPPEQHGSVDLQDFRTALAKLPDD
QREAILLIGASGFAYEEAAEICGCPVGTIKSRVSRARLRLQELLGIENENEFGPDAQMSA
VTAAATAR
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcgaaagagccggagcagacagaatacaatttcaaacgggaaatgctggcggcactg
ccaaacctgcgcgcattcgcgatctcactcatccgttcgagggatcgcgctgacgacctt
gtgcaggatacgatcatgaaggcctgggcgaaacaggagagtttccagcctggcaccaac
atgcgcgcatggctggtgacgatcctgcgtaacgaattctacagccagattcgcaagtcc
ggccgcgaagtacaggataccgacggggtttacacctcgcgcctgtcggtgccgccagaa
cagcatggttcggtcgatcttcaggattttcgtacggcacttgcaaaattgcccgacgat
cagcgcgaagcgatattgctgattggcgcctccggctttgcttacgaagaagcagccgag
atttgcggttgcccggttggcacgatcaagagccgtgtcagccgcgcgcgattgcgcctt
caggaacttctcggcatcgaaaacgaaaacgagttcggtcctgacgcgcagatgagcgcc
gttaccgccgcagccaccgcgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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