KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_05445
Entry
EYD00_05445       CDS       T05906                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:agt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EYD00_05445 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agt03400]
    EYD00_05445 (uvrA)
DNA repair and recombination proteins [BR:agt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EYD00_05445 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EYD00_05445 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N BCA_ABC_TP_C nSTAND1 DnaJ_CXXCXGXG AAA_29 AAA_16 RsgA_GTPase AAA_33 AAA_21
Other DBs
NCBI-ProteinID: QBJ12885
Position
circular:complement(1079596..1082517)
AA seq 973 aa
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFA
DRPLPPEETAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPS
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWSD
LSKEAQHAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINKLHIGEVTEMSIRTARDWFEVLPESLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGSPQ
EVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV
EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL
LERRPAGKREAAE
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgagtgaactgaagacgatttccatccgtggtgcccgtgaacacaatctcaagggtatc
gatctcgatctgccacgcaacaagctgatcgtcatgaccgggctttccggctcaggcaag
tcgtcgctcgccttcgatacgatctacgccgaaggccagcgccgttatgtcgaaagcctc
tcggcctatgcgcgccagttcctcgaaatgatgcagaagccggatgtcgaccagatcgag
ggcctgtcgccggcaatctccatcgaacagaagaccacctcgcgcaacccgcgctccacg
gtcggcacggtcaccgagatctacgactatatgcgccttctcttcgcgcgtgtcggtgtc
ccctattcgccggccacgggcctgccgattgaaagccagacggtcagccagatggtcgac
cgcatcctcgctttcgaggaaggcacgcgtctttacatcctcgcgccgatcgtgcgcggc
cgcaaaggcgagtacaagaaagaacttgccgagctgatgaagaagggcttccagcgcgtc
aaggtggacggccagttctacgagatcgccgacgttcctgctctcgacaagaagtacaaa
cacgacattgacgtggtggttgaccgcgccgtcgtgcgcccggatatggccgcgcgtctt
gccgacagtctcgagacctgcctcaagcttgccgatggtctggcaattgccgaatttgcc
gacaggcccctgccgcccgaagagacagccgccggtggttccgccaacaagtctctcaac
gagacccatgagcgggtgctgttttcggaaaaattcgcctgccccgtttccggcttcacc
attccggaaatcgaaccgcgtctcttctccttcaacaaccccttcggcgcctgccccagc
tgcgatggccttggctcgcagcagaaggtggatgagaacctgatcgtgccggagccggcc
cgtaccctgcgtgacggggccattgctccctgggcaaaatcatcgtcgccctattacaac
cagacgctggaagcgctcggcaaagccttcggattcaagctttcgagcaagtggtccgat
ctttcgaaggaggcgcagcacgccattcttcagggcactgacgacaagatcgagttcaat
taccaggacggcgcccgctcctacaagacagtcaagaacttcgaaggcatcgtgcccaat
ctggagcggcgctggaaagagacagacagcgcctgggcgcgcgaggaaatcgagcgctat
atgtcggcagccccctgcccggcctgcgccggttaccgcctgaagccggaggcgctggcg
gtcaagatcaacaagctgcatatcggtgaagtcaccgaaatgtcgatccggacggcgcgc
gactggtttgaggtgctgccggaaagcctgaacgcgaagcagaatgaaattgccgtccgt
attctcaaggaaatccgcgaacgcctgcgattcctcaacgatgtagggctggattatctc
agcctgtcgcgcaattcgggcacgctgtcgggcggggagagccagcgtatccgtctggcc
tcgcagatcggctctggcctcaccggcgttctctacgttctcgatgagccctcgatcggc
ctgcaccagcgcgacaatgcgcgcctgctggatacgctcaaacatctgcgcgatatcggc
aacaccgtcatcgtggtcgaacatgatgaggacgccattctgacggcggattatgtggtc
gatatcggcccggcggccggtattcacggcggccaggtgattgccgaaggatccccgcag
gaagtgatggccaatccgaaatcgctgaccggcaaatatctctccggtgaactcggcgtt
gccgtgccggctgagcgccgcaaacccaagaagggccgcgagatcaaggttttcggcgca
cgcggcaacaacctgaagaatgtcacggccgctgtgccgctcggtgttttcacggccgta
accggggtttcgggtggcggcaaatccaccttcctgatcgagacgctctataaatcggcg
gcgcgcagggtcatgggcgcgcgtgaaatcccggccgaacacgaccgcatcgatggtttc
gaattcatcgacaaggtgatcgatatcgaccagtcgccgatcggacgcacgccgcgctcc
aacccggccacctataccggcgcctttacgccgatccgtgactggttcgccggcctgccg
gaagccaaggctcgtggttacgcgcccggccgtttctccttcaacgtcaagggtggccgc
tgcgaggcctgccagggcgacggggtgatcaagatcgagatgcacttcctgcctgacgtc
tacgtcacctgcgacgtctgccacggcaagcgttataaccgcgagacgctggacgtcacc
ttcaagggcaaatccatcgccgacgtgctggatatgacggttgaggagggcgtcgaattt
ttcgccgccgttcccgccgtgcgcgacaagctgcaatcgctcttcgatgtcggcctcggt
tacatcaaggtcggacagcaggccaatacgctttcaggcggcgaggcgcagcgcgtcaag
ctcgccaaggaactgtcgaagcgctcgacgggccgcacgctctatattctcgacgagccg
acgacgggcctgcatttccacgacgtcaacaagctgctcgaaatgctgcatgcgctggtg
gaacagggcaattccgtggtggtgatcgagcataatctcgaagtcatcaagacggcggac
tggatcatcgatatcgggcctgaaggcggcacgggcggcggcgaagtggtggccacgggc
acgccggaagacatcgtcaaggtggagcgttcctataccggccacttcctgaaggagctt
ctggagcgccggccggccggaaaacgggaggctgcggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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