KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_05730
Entry
EYD00_05730       CDS       T05906                                 
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00260  Glycine, serine and threonine metabolism
agt00630  Glyoxylate and dicarboxylate metabolism
agt00785  Lipoic acid metabolism
agt01100  Metabolic pathways
agt01110  Biosynthesis of secondary metabolites
agt01200  Carbon metabolism
Module
agt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:agt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    EYD00_05730 (gcvP)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EYD00_05730 (gcvP)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EYD00_05730 (gcvP)
Enzymes [BR:agt01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     EYD00_05730 (gcvP)
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase Aminotran_5
Other DBs
NCBI-ProteinID: QBJ12941
Position
circular:1131592..1134456
AA seq 954 aa
MTTPTEFHFTDYQPYDFANRRHIGPSPSEMAEMLKVVGYKSLDALIDATVPSSIRQKVPL
TWGAALTEREALDRLRETANKNQVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDA
NCHPQTIALIETRAAPLGWKVIVGNPFTDLDPVDVFGAIFQYPGTHGHLSDFSGLISRLH
QTGAIAAVAADLLALTLLKSPGEMGADIAIGTSQRFGVPVGYGGPHAAYMAVKDAHKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYGVFHGPQGI
KAIAQQTHQKAVLMAKGLEKLGYTIEPETFFDTITVEVGHMQGVILRSAVAEGVNLRKVG
ATKIGMSLDERTRPATLEAVWRAFGGNFSVSDFTPDYRLPKELLRTSQYMTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPANQALG
YKEMIDDLSEKLCSVTGYDAFSMQPNSGAQGEYAGLLTIRNYHLANGGTHRDVCLIPTSA
HGTNPASAQMVGMKVVPVKVRDNGDIDIDDFRAKAEQYAENLSCCMITYPSTHGVFEETV
REICEITHKHGGQVYLDGANMNAMVGLARPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPYLPGHPATDGREGAVSAAPFGSPSILPISWSYCLMMGGEGLTQATKVAILNA
NYIAERLKGAYDVLYKSETGRVAHECIIDTRPLADSCGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCDAMLAIREEARDIEEGRADKTNNPLKNAPHTVEDLVG
EWDRPYSREKGCFPPGAFRIDKYWSPVNRIDNVYGDRNLICTCPPMEAYAEAAE
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgacgacgcccaccgaattccatttcaccgactatcagccctatgatttcgccaaccgg
cgtcacatcgggccgtcgccgtcggaaatggccgagatgctgaaggtcgtcggctataag
agcctcgacgcgctcatcgacgccaccgttccctcctccatccgtcaaaaagtgcctctc
acctggggtgcggccttgaccgaacgtgaggcgctggatcgtcttcgcgagacggcaaac
aagaaccaggtcctgacctcgctgataggtcagggctattacggcaccatcacgccgccg
gtcatccagcgcaacattctggaaaacccggcctggtacacggcctatacgccataccag
ccggaaatcagccagggccgtcttgaggcgctgctgaactaccagaccatggtctgcgat
ctgaccggccttgacgtcgccaacgcctcgctgctcgatgaagcgactgcggccgccgaa
gccatggccatgtgccagcgcgtcgcgaaatccaaggcgaccgccttcttcgtggatgcc
aattgccatccgcagaccatcgcgctgatcgagacccgtgcggccccgctcggctggaag
gtgattgtcggcaaccccttcaccgatctcgatccggtcgacgtgtttggcgcgatcttc
cagtatcccggcacgcacggacatctcagcgatttctccggcctgatttcccgcttgcat
cagacgggcgcgattgccgccgtcgccgccgatcttctggccctgacgctgctgaaatct
cccggcgaaatgggcgctgacatcgccatcggcacctcgcagcgctttggcgttccggtc
ggctacggcggtccgcatgccgcttacatggccgtcaaggatgcgcataagcgctccatg
ccgggccgtctcgtcggcgtctcggtcgatgcgcgcggcaaccgcgcctatcgcctgtcg
ctgcagacccgcgagcagcatattcgccgtgagaaggccacctccaacatctgcacggcg
caggtgctgctggcagtcatggcttcgatgtacggcgtcttccatggcccgcagggcatc
aaggcgattgcccagcagacccaccagaaggccgtgctgatggccaagggactggaaaag
ctcggttacaccatcgagccggagaccttcttcgacacgatcaccgtcgaagtcggccat
atgcagggcgttatcctgcgttcggccgtcgcggaaggggtgaatctgcgcaaggtcggc
gccaccaagatcggcatgagccttgacgagcgtacgcgcccggcaacgctggaagccgtc
tggcgcgctttcggcggcaatttctcggtctcggatttcacgccggactatcgcctgccg
aaggagctgctgcgtaccagccagtacatgacgcatccgatcttccacatgaaccgtgcc
gaaagcgagatgacgcgctacatccgccgtctttcggaccgcgatctggcgctcgaccgc
tcgatgatcccgctcggttcctgcaccatgaaactcaatgcgacggcagagatgctgccg
atcacctggccggaattttccgacatccatcccttcgtaccggccaatcaggcactcggt
tacaaggagatgatcgacgatctctccgaaaagctgtgctcggtcacaggttacgacgcc
ttctccatgcagccgaattccggtgcgcaaggcgagtatgccgggcttttgaccatccgc
aattatcacctcgccaatggcgggacacaccgtgatgtctgcctcattccgacctcggcg
catggcaccaatcctgcctcggcgcagatggtgggcatgaaggtggtgccggtgaaagtg
cgtgataacggtgatatcgatattgatgatttccgtgcaaaagcagagcagtacgccgaa
aacctctcatgctgcatgatcacctatccgtccactcacggcgtgttcgaggagacggtt
cgcgaaatttgcgagatcacccataagcatggcggtcaggtgtatcttgatggcgcgaac
atgaacgccatggtgggccttgcccgtcccggcgatatcggctccgacgtttcgcacctt
aacctgcacaagaccttctgcattccgcacggtggcggtggtccgggcatggggccgatc
ggcgtcaaggcgcatcttgccccttacctgcccggccatccggcgaccgatggccgcgag
ggtgcggtgtctgccgccccgttcggttcgccgtccatcctgcccatttcctggagctac
tgcctgatgatgggcggcgaagggctgacgcaggcaaccaaggttgcgatcctcaacgcc
aactacatcgccgagcggctgaagggtgcttatgacgtgctctacaaatccgaaacggga
cgcgtggcacatgaatgcattatcgacacccgcccgctggcagacagctgtggcgtgact
gtcgatgacgtggccaagcgcctgatcgactgcggtttccacgcgccgaccatgagctgg
ccggttgccggcacgctgatgatcgagccgacggaatccgagaccaaggcggaactcgac
cggttctgtgatgccatgctggccatccgcgaggaagcccgcgacattgaggaaggccgc
gcggacaagacgaacaatccgctcaagaacgcgccccatacggtcgaggacctcgtcggc
gaatgggaccgtccttatagccgcgaaaagggatgcttcccgcccggcgcattccgcatc
gacaaatactggtcgccggtcaaccgcatcgacaatgtctatggcgaccgcaacctcatc
tgcacctgcccgccgatggaggcctatgccgaggcggccgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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