KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_06565
Entry
EYD00_06565       CDS       T05906                                 
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:agt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    EYD00_06565
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:agt01007]
    EYD00_06565
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:agt03016]
    EYD00_06565
Enzymes [BR:agt01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     EYD00_06565
Amino acid related enzymes [BR:agt01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   EYD00_06565
Transfer RNA biogenesis [BR:agt03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    EYD00_06565
 Prokaryotic type
    EYD00_06565
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N FAM184 Exo84_C ERM_helical
Other DBs
NCBI-ProteinID: QBJ13083
Position
circular:complement(1298818..1300101)
AA seq 427 aa
MHDIKWIRENPEAFDAALARRGAEPAAAGLIALDEKRRSVIQSLQDMQSRRNAASKEIGA
AMAQKNMELAEKLKAEVADLKDKMPRAEEEDRQVTAELNDALSRLPNMPFDDVPDGKDEH
DNVVTRVVGQKPGWNHEAREHFEIGEALGYMDFERAAKLSGSRFTVLTSQLARLERALGQ
FMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFSEDLFKTTDGRWLIPTAEVTLTNLV
AGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE
RMTACAEEVLKRLGLHFRTMTLCTGDMGFGARKTYDLEVWLPGQNTYREISSCSVCGDFQ
ARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLENYLNDDGSVTIPDVLLPYMGGL
TRIEKAA
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcacgacattaaatggatacgtgaaaaccccgaagcttttgacgcggcgctcgcacgc
cgtggcgcggagcctgcggccgcaggtctgatcgcgctcgatgaaaagcgccgttccgtc
atccagtccctgcaggacatgcagtcccgccgcaatgccgcctccaaggaaatcggcgcc
gccatggcgcagaagaacatggagcttgccgaaaaactcaaagccgaggtcgccgacctc
aaggacaagatgccgcgtgccgaggaggaggaccgccaggtcaccgccgagttgaacgac
gccctgtcgcgcctgccgaacatgcccttcgacgatgtgcccgatggcaaggacgagcat
gacaatgtggtgacccgcgtcgtcggccagaagcccggctggaaccacgaggccagggaa
catttcgaaatcggcgaagcgcttggttatatggatttcgagcgggccgccaaactttcg
ggttcgcgtttcaccgttctcaccagccagctcgcgcggctggagcgggcgctcggccag
ttcatgatcgacctgcacacctcggaacatggctataccgaagtttcctcgccgctgatg
gtgcgcgacgaggcgatgttcggcacggggcaattgccgaaattctccgaggacctgttc
aagaccaccgatggccgctggttgatcccgacggcggaggtgaccctgaccaacctcgtg
gccggcgaaatcctcgagcaggaaaagctgcccctgcgtttcaccgcactcacaccgtcc
ttccgctcggaagcgggttcggcaggccgtgacacgcgcggcatgctgcgccagcaccag
ttctggaagtgcgagctcgtctccatcaccgacgcggaaagcgctgtcgccgagcatgag
cgcatgacggcctgcgccgaggaagtgctgaagcggctgggcctgcatttccgcaccatg
acgctctgcaccggtgacatgggctttggcgcgcgcaagacctacgatctggaagtgtgg
ctgcccggtcagaatacctatcgcgaaatctcgtcctgctcggtctgcggcgatttccag
gcgcgccgcatgaatgcgcgctatcgcggcaaggacgacaaggcgacgaagttcgtgcat
acgctgaacggttccggcacggctgtcggccgctgcctgatcgccgttctcgaaaattac
ctgaacgacgatggctctgtcacaattcctgatgtgctgctgccctatatgggcggtctg
acgcggatcgaaaaggcggcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system