KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_06715
Entry
EYD00_06715       CDS       T05906                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00230  Purine metabolism
agt00240  Pyrimidine metabolism
agt01100  Metabolic pathways
agt01232  Nucleotide metabolism
Module
agt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
agt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:agt00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    EYD00_06715
   00240 Pyrimidine metabolism
    EYD00_06715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agt03400]
    EYD00_06715
Enzymes [BR:agt01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     EYD00_06715
DNA repair and recombination proteins [BR:agt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    EYD00_06715
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN Acetyltransf_11
Other DBs
NCBI-ProteinID: QBJ13111
Position
circular:1327837..1331655
AA seq 1272 aa
MRIERRFTKPGQSPYAEIDFRKAVSEIKNPDGSIVFRLADIDVPAQFSQVATDVLAQKYF
RKAGVPKFLKKVEENDVPSFLWRSVPDEKALKDVPEAERYGSETDARQVFDRLAGTWAYW
GWKGKYFSSEEDALAFRDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG
EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE
EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENY
VKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGDWNLT
ARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAAGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDQATKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAELSY
EYRTLGLGYANIGGLLMSSGIPYDSAEGRAIAGALTAIMTGVSYATSAEMAGELGPFPGF
APNRENMLRVIRNHRRAALGQLEGYEGLSVNPVALVHGDCPDQDLIAHATAAWDKALELG
EKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDALR
SLGYSESQIAEIEAYAVGHGNLNQAPGINPSTLKAKGFTDEKIEAVNGALKSAFDIKFVF
NQWTLGADFLKETLKVSDEQLSDMSFNLLEHLGFGKKDIEAANVHVCGAMTLEGAPFLKN
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYM
LSWKLALKANALYRDGSKLSQPLNASLVGDEDDEDLIEDLIQQPAAQQAVTITEKIVERV
IERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLVSTGWTRGYKPTIVSRNDGERTASEPKGSATA
APARASANVTSFAGSAARKLEPTVAIATSEIVSFKRDYEERAKELAEEIAEEVIDEVVQE
AQQTATALFSDKAAADAASAKTEAKKVENERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGATSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgcattgaacgccgcttcacgaagcccggccaatcgccttatgcggagatcgacttc
cgcaaggccgtcagtgaaatcaagaacccggatggatccatcgtgttccgtctggctgac
atcgacgttcccgcgcagttcagccaggttgccaccgacgttctggcgcagaaatatttc
cgcaaggccggcgtgccgaagttcctgaagaaggttgaggaaaatgacgttccttccttc
ctctggcgctccgtgcccgatgaaaaggctctgaaggatgttccggaagccgagcgctac
ggctccgagaccgatgcacgccaggttttcgatcgcctggccggcacctgggcctattgg
ggctggaagggcaaatatttctcgtccgaagaagatgccctcgccttccgcgacgagctt
gcctatatgctcgccacccagcgtgttgcccccaactccccgcaatggttcaacaccggc
ctgcactgggcctatggcattgatggtcccggccagggccacttttatgtcgaccccttc
accggcaagctgaccaagtccaagtccgcttacgaacatccgcagccgcatgcctgcttc
atccagtccgttgaggacgacctcgttaatgaaggcggcatcatggatctgtgggtgcgt
gaagcgcgcctgttcaaatacggctccggcactggctccaacttctcctatctgcgtggc
gaaggcgaaaaactctccggcggcggcaaatcgtcaggcctgatgagcttcctcaagatc
ggtgaccgcgcagccggcgccatcaagtccggcggcacgacccgccgcgcagcgaagatg
gtcgtcgttgatgccgaccaccccgatatcgaagcctatatcgactggaaggtgaacgag
gagcagaaggttgccgctctcgtcaccggttccaagatcgtcgccaagcacctgaaggcg
atcatgaaggcctgcgtcaactgcgaagctgacaacggcgattgcttcgacccggccaag
aaccctgccctgaagcgcgaaatccgcgccgccaagaaggacatggtgccggaaaactac
gtcaagcgcgtcatccagttcgccgagcagggttacaaggacatccagttcaagacctat
gacacggactgggattcggaagcctacctcacggtgtcgggccagaactccaacaactcc
gtctcgctgaaggacgatttcctgcgcgctgtcgaaaatgacggtgactggaacctcacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcccgcgacctctgggaaaagatt
tcccacgccgcctgggcgtctgccgatccgggtctgcacttcaacacgacgatgaacgac
tggcacacctcgccggcggccggcccgatccgcgcctccaacccgtgctcggaatacatg
ttcctcgatgacacggcctgcaaccttgcctcgctgaaccttctgcagttcaaggatcag
gcgacgaagcgcatcgatatcgccgattacgaacacgccgttcgcctctggaccgtcgtg
ctcgaagtgtccgtcatgatggcgcagttcccgtcgcgccagatcgccgaactctcctat
gagtaccgcacgctgggcctcggttacgccaatatcggcggcctcctgatgtcctccggc
attccctatgacagcgccgaaggccgcgccattgccggtgcgctcaccgccatcatgacc
ggcgtgtcctatgccacctcggccgaaatggccggcgagcttggccccttcccgggcttt
gcgcccaaccgcgaaaacatgctgcgcgtcatccgcaaccaccgccgcgccgcccttggc
cagttggaaggttatgagggcctgtcggtcaacccggtcgcactcgtccatggcgactgc
ccggatcaggacctgatcgcccacgcaacggccgcctgggacaaggcgctggaacttggc
gaaaagcacggctaccgcaacgcccagaccaccgttatcgcacccacaggcacgatcggc
ctcgtgatggattgcgacacgaccggtatcgagcccgatttcgcgctggtgaagttcaag
aagctcgccggtggcggttacttcaagatcatcaaccgcgccgttccggatgcgctgcgt
tcgctcggttactccgaaagccagatcgccgagatcgaggcctatgccgtcggccatggc
aatctcaaccaggctcccggcatcaacccctcgacgctgaaggccaagggcttcaccgat
gagaagatcgaggccgtcaacggcgcgctgaaaagcgccttcgacatcaagttcgtcttc
aaccagtggacgctcggcgccgacttcctcaaggaaacgctgaaggtttccgacgagcag
ctctccgacatgagcttcaacctgctcgagcacctcggcttcggcaagaaggacatcgaa
gcggccaacgttcacgtctgcggcgcgatgacgctggaaggcgcaccgttcctgaagaac
gagcatctgcccgtcttcgattgcgccaacccctgcggcaagatcggcaagcgttacctc
tccgtcgaatcgcatatccgcatgatggcggcggcacagcctttcatctccggcgcgatc
tccaagacgatcaacatgccgaacgatgcgacggttgaggattgcggcgcagcctacatg
ctctcctggaagctggcgctgaaggccaacgccctttaccgtgatggttccaagctttcc
cagccgctcaatgcgtcgctggtgggagacgaggacgacgaagacctgatcgaagacctg
atccagcagcccgccgcacagcaggccgtgacgatcaccgaaaagatcgtcgaacgcgtc
atcgagcgtgtctcacgcgagcgtgaaaagctgccgaaccgccgtcagggttacacccag
aaggcaactgtgggcggtcacaaggtctatctgcgcaccggtgaattcggtgatggccgc
atcggcgaaatcttcatcgacatgcacaaggaaggcgctgccttccgcgcaatgatgaac
aactttgccatcgccatttcgctcggcctgcaatatggcgtgccgctggaagaatatgtg
gaggccttcaccttcaccaagttcgaaccggccggcatggtgcagggcaacgacgcgatc
aagaacgccacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgccacgatctcgcccatgtcgatacgtccgacttctccaacacggcgctcggcaagggt
atccaggaaggcaagaccaacctcgtttccaccggctggacccgcggttacaagccgacc
atcgtgtctcgcaatgacggcgaacgcaccgcttccgagcccaagggttcggcaacggca
gcccctgcccgcgcctcggccaacgtgacctcgtttgcaggctctgccgcccgcaagctg
gaaccgacagtcgccatcgcaacctccgaaatcgtctccttcaagcgggactatgaagag
cgcgccaaggaactggccgaagaaatcgccgaagaagtgatcgacgaggtcgtccaggaa
gcccagcagacggcaaccgccctcttctccgataaggccgccgcagacgccgcttcggcc
aagacggaagccaagaaggtcgaaaacgaacgccgcatgcgctcgatcgctcaggggtat
acgggcaacatgtgctcggaatgccagaacttcacgatggtgcggaacggcacttgcgag
aagtgcgatacttgtggtgcgacgagcggttgcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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