KEGG   Acinetobacter guillouiae: AS4_02490
Entry
AS4_02490         CDS       T06251                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
agu  Acinetobacter guillouiae
Pathway
agu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:agu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AS4_02490 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agu03021]
    AS4_02490 (rpoB)
   03400 DNA repair and recombination proteins [BR:agu03400]
    AS4_02490 (rpoB)
Enzymes [BR:agu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AS4_02490 (rpoB)
Transcription machinery [BR:agu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AS4_02490 (rpoB)
DNA repair and recombination proteins [BR:agu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AS4_02490 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 DOCK-C2
Other DBs
NCBI-ProteinID: BAP35189
Position
270356..274444
AA seq 1362 aa
MAYSYTEKKRIRKNFGKLPQVMHAPYLLSIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTFAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVFVRIDRRRKLLATVVLRALNYSNEQILNMFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIVDNDGKAIVEQGKRINARHVRQMEAAGLTKLPVPDEYLYERIT
AEDIVLKDGEVITANTVLSHEILVRIAEGGIKQFNILFTNDIDRGSFVADTLRADTTSGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSTERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNDDIIDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLNQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANNFGFLETPY
RRVVDGRVTDDVEYLSAIEEVGTVIAQADSALDKDGHLTEDFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMEANVAHD
SGVCVIAKRGGRIEFVDASRVVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQKVLV
SMGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVAAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVSSSVKGTVIDVQVFTRDGIEKDERAQAIEKA
QLDAYRKDLKEEFKIFEEAARERIIRLLKGQESNGGGTTKRGDKLSEDVLSGLELVDLLE
VQPTDEGIAERLTQIQVFLKEKSYEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDIHGVPVDVVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIDKMMKEQRTVLELRDFLDKIYNKVGGEQEDLDSLTDEEILVLSGNLRKGVP
LATPVFDGAEESQIKELLELGGISRTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtcatgcatgctccgtacctgctctcgattcaagtcgactcgtacagaacattcttgcaa
gacggcaaaacaccaaaaaatcgcgaagatatcggtctccaagctgcatttcgttcagtt
tttcctattgaaagttattcgggcaatgctgctttagaattcgttgagtatagtcttggt
aaaccagagtttgatgttcgcgaatgtattcttcgtggctcaacctttgcggcaccaatg
cgcgttaaaattcgtttgatcatcaaagatcgtgaaacgaaatctattaaagacgtacgt
gaacaagaagtgtacatgggtgaaatgccactcatgactgagaatggtacctttgtcatc
aatggtactgagcgtgtaatcgtatctcaattacaccgttcaccaggcgtattctttgac
catgataaaggtaaaacgcattcaagcggtaaagtgctttattcagcacgtattattcct
tatcgtggttcatggttagattttgagtttgatgctaaagatttagtctttgtacgtatt
gaccgtcgtcgtaaattacttgcgactgttgtgttacgtgcattgaactatagcaatgaa
caaattctgaatatgttctacgaaaaagtacctgtatatcttgatatgggtagctatcag
attgaccttgtgcctgaacgtcttcgtggtgaaatggctcaatttgatatcgtggacaat
gatggtaaagccattgttgaacaaggtaaacgtattaatgctcgccatgtacgtcaaatg
gaagctgctggtttaactaaacttccagttccagatgaatatttgtatgagcgtattact
gctgaagatatcgtacttaaagacggtgaagtaattactgctaacactgtattaagtcat
gaaattttggtcagaattgctgaaggtggtattaaacaatttaatatcctgttcaccaat
gacatcgatcgtggttcttttgttgctgacaccttacgtgcagatacaacatctggtcgt
gaagaagcacttgtagaaatctacaaagtgatgcgtccaggtgagccaccaacgaaagaa
gcagctgaaaacttattcaataacttattcttctctacagagcgctatgatttatcgcct
gtgggtcgtatgaagtttaaccgtcgtttgggtcgtccttacgaagtaggtacagatcag
aagtctcgtgaagtagaaggtattctttctaacgatgacatcattgatgtactgaaaaca
ctggtagaaattcgtaacggtaaaggtgaagtcgacgatatcgatcacttgggtaaccgt
cgcgtacgttctgttggtgaaatgacagaaaaccaattccgtgttggtttagttcgtgtt
gaacgtgctgttaaagagcgtttaaaccaagctgaaacagataacttgtctccacaagat
ttgatcaatgcgaaaccagttgctgctgcaatcaaagaattctttggttcaagccaattg
tcacagtttatggatcaaaacaacccattgtcagaaattacacacaaacgtcgtgtatct
gcgcttgggcctggtggtttgacacgtgaacgtgcgggctttgaagtacgtgacgtacat
caaactcattatggtcgtgtatgtccaattgaaacacctgaaggaccaaacattggtttg
atcaactcgctttctgtttatgcaaaagcgaacaacttcggtttcttggaaacaccatac
cgtcgcgttgttgatggtcgtgtaacagatgatgttgaatatttatctgcaattgaagaa
gtaggtactgttattgcacaggccgattctgcattggataaagatggacacttaacagaa
gacttcgtttcagtacgtcaccaaggtgacttcgttcgtatgccacctgaaaaagtgacg
catatggatgtatctgctcaacaggttgtatctgtcgctgcatcacttattccattcctt
gaacacgatgatgccaaccgtgcattgatgggttcaaacatgcaacgtcaggctgttcct
acattgcttgctgataaaccacttgtgggtaccggcatggaagcaaacgtagcgcacgac
tctggtgtatgtgtgatcgcgaaacgtggcggacgcattgagtttgtagatgcatcacgt
gtggttattcgtgtcaacgaagatgaaatgatcgcgggtgaagcaggtgtagatatctac
aacttgatcaaatacacgcgttcaaaccaaaacacatgtattaaccaaaaagtgcttgtg
agcatgggcgataaagtcggccgtggtgacgttcttgctgatggtccatcaactgatggt
ggtgaattagcattgggtcagaacatgcgtgtcgcgttcatgacttggaacggttataac
tacgaggactcgattttattatctgaacgtgttcttcaagaagatcgtttaacgtcaatt
catattcaagaattatcatgtgttgcacgtgatacgaagttaggtgcggaagaaatcact
gccgatattcctaacgtaggtgaagcagcgttatctaaacttgatgaatcaggtattgtt
tatatcggtgctgaagttgcagcgggtgatattcttgttggtaaagtgacgcctaaaggt
gaaacacaattaacccctgaagaaaaattacttcgtgcaatctttggtgagaaagcggca
gacgttaaagattcatctttacgtgtttcttcaagcgttaaaggtacagtcatcgacgtt
caagtgtttacacgtgacggtatcgagaaagatgaacgtgctcaagcgattgagaaagcg
caacttgatgcttatcgtaaagacttgaaagaagaattcaaaatcttcgaagaagctgct
cgtgaacgtattatccgtttgttaaaaggccaagagtcgaatggcggcggtacgaccaag
cgcggtgataagctatctgaagatgtattgtctggtttagagcttgttgatcttttagaa
gttcaaccaacagatgaaggcatcgctgaacgcttaactcaaattcaagtgttcttgaaa
gagaagagctacgagattgatgagaaatttgctgagaaaaaacgcaaactttctacaggt
gatgagcttacaacaggtgtcttgaaagttgttaaagtttacttagctgtaaaacgtcgt
atccagcctggtgataagatggcgggtcgtcacggtaacaaaggtgttgtatcaaacatc
ttgcctgttgaagacatgccgcatgacatccatggtgttccagttgatgtcgtacttaac
ccattgggtgtaccatcacgtatgaacgtgggtcagattcttgaaactcacttaggtatg
gctgcaaaaggtcttggcgataagatcgacaagatgatgaaagagcaacgtaccgttctt
gagcttcgtgatttcttagacaagatttataacaaagttggtggcgagcaagaagatctt
gatagcttaactgatgaagaaatcttggtgttatcaggtaacttgcgtaaaggtgttcct
ttagctacgccagtatttgatggtgcagaagaaagtcagatcaaagagttacttgagctt
ggtggtatctcacgtacaggtcaaacagtattgtatgacggacgtacaggtgagcgtttt
gaccgcccagtaactgttggttatatgtacatgctcaagttgaaccatttggttgatgac
aagatgcatgcacgttctactggttcttattcacttgtaactcaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtctgggcactagaagcttat
ggtgctgcttatacacttcaagaaatgcttactgtgaagtcggatgacgttgaaggtcgt
actcgcatctataagaacattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgtttaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system