KEGG   Aeromonas hydrophila YL17: AI20_14625
Entry
AI20_14625        CDS       T03186                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ahd  Aeromonas hydrophila YL17
Pathway
ahd02024  Quorum sensing
ahd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AI20_14625
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AI20_14625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahd03019]
    AI20_14625
   03036 Chromosome and associated proteins [BR:ahd03036]
    AI20_14625
Messenger RNA biogenesis [BR:ahd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AI20_14625
Chromosome and associated proteins [BR:ahd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AI20_14625
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AHV36374
Position
2118371..2118634
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAVNHHQHAQGAAGEEQGEAEA
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctccaagacccgtttttgaatgcgctgcgccgtgagcggatt
cctgtttctatctatttggtgaacggcatcaagctgcagggtcagatcgaatcgtttgac
cagtttgtcattttgctgaagaacaccgtgagccagatggtttacaagcacgccatctcc
accgtggtgccggcccgtgccgtcaaccatcaccagcacgcccagggcgcggctggcgaa
gagcagggtgaagccgaggcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system