KEGG T03886: VU14

Aeromonas hydrophila AH10: VU14_04030

Entry

VU14_04030        CDS       T03886

Name

(GenBank) 2'-5' RNA ligase

K01975

RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]

Organism

ahi Aeromonas hydrophila AH10

Brite

KEGG Orthology (KO) [BR:ahi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahi03016]
    VU14_04030
Enzymes [BR:ahi01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     VU14_04030
Transfer RNA biogenesis [BR:ahi03016]
Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    VU14_04030

SSDB

Motif

Pfam:

LigT_PEase 2_5_RNA_ligase2

Other DBs

NCBI-ProteinID:

AKA19455

Position

complement(850290..850817)

AA seq 175 aa
MAKLFFALPAEALAPDLVAWRDQLPWPGQPVPAANLHLTLAFLGEADQLTTTRLMAAVER
QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHI
TLSRKASEPPALLPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS

NT seq 528 nt +upstreamnt +downstreamnt
atggccaaactcttctttgccctgcccgccgaggcgctggcacccgatctcgtcgcctgg
cgcgaccagctgccctggccgggtcaaccggtgcccgccgccaatctccacctgacgctg
gccttcctcggcgaagcggatcagctcaccaccacccgcctgatggctgccgtcgagcgc
cagcactgcccgccgctcaccatagcgctcaatgaaaccggctggttcggccgcgccaag
gccgcctgggtcggcccgacggagtggcccaacgagctcaccgtgctggccagggcgctg
cgtcgccacggcgagaagctgggacttggcaacggcgagcaaggttatcgcccccacatc
accctgtcgcgcaaggcgagcgaaccgccggcgctgctgcccgcccccgatttcgtgctg
caggccgaccgcttctgcctctatcaatccctttccaccccggacggggtgcgctacgag
cccctcgcctgctggccgctgcgggccagagagaaaatggcatcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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