KEGG   Aeromonas hydrophila AH10: VU14_16735
Entry
VU14_16735        CDS       T03886                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03030  DNA replication
ahi03430  Mismatch repair
ahi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VU14_16735 (dnaE)
   03430 Mismatch repair
    VU14_16735 (dnaE)
   03440 Homologous recombination
    VU14_16735 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahi03032]
    VU14_16735 (dnaE)
   03400 DNA repair and recombination proteins [BR:ahi03400]
    VU14_16735 (dnaE)
Enzymes [BR:ahi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VU14_16735 (dnaE)
DNA replication proteins [BR:ahi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VU14_16735 (dnaE)
DNA repair and recombination proteins [BR:ahi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VU14_16735 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: AKA19547
Position
complement(3756256..3759735)
AA seq 1159 aa
MAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAHGK
GVKPIVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPEPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQQIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggctgaaccccgttttatccacctgcgggtccactccgacttctccatggtcgacggc
ctgcagaagatcaatcccatcgtcggcgcggcggcggccaacaacatgccggcgctggcg
ctgaccgaccagatgaacatgtgcggcctggtacgcttctacggcgccgcccacggcaag
ggcgtcaagcccatcgtcggggccgacttctgggtgcagagtgacgagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggtcacgtgcaggggcgcccggtcatcgacaaggcctgg
ctggccgagcacgccaagggagtgatcgtgctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgtctcgccttctatcagacc
cacttccccgacgcctattacctggagctgctgcgcaccggccgccccgatgaagaggtc
tacctgcacatggcggtggccattgccaccgagttcgcgctgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgatgcccacgagatccgggtcgccatccac
gacggctacaccctgatggacaagcgccggccgcgccgctacagcccgcagcagtatctg
cgcagccaggaggagatggcggagctgtttgccgacatccccgaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttcccgaccggtgacatgaccaccgaagatttcctggtcatgaagtcgaaagaggggttg
gaggagcggctcgaattcctgttcccggagccggcggtgcgggccgagcgccgtcccgag
tatgacgagcggctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgttggcccg
ggccggggctcgggggcgggttccctggtggcctacgccctcaagatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgggtatccatgccc
gacttcgacgtcgacttctgcatggacaggcgcgacgaggtgatcgaccacgtctccgag
atgtacggccgggaggcggtatcgcagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggatgtgggccgggtgctgggccacgcctatggcttcgtcgatcgcatctcc
aagctcattccgccggatccgggcatgacgctcgccaaggcgttcgaggccgaacccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcgcgccgc
ctcgaaggggtggtgcgtaacgccggtaaacacgccggtggcgtggtgatcgcgcccacc
aagatcaccgacttcgcgccgctctactgcgatgacgaaggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctcggcctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccactgcggtattccagctcgaatcccgtggcatgaaggatctcatc
aagcggctgcagcccgactgcttcgaagacatgatcgcactggtggcgttgttccgccca
ggcccgctgcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctatccggacgagaagtggcagcacgagagtctgcagccgatcctcgagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagaccctggcgggttat
acgctgggtggcgcggacatgctgcgccgggcgatgggtaagaaaaaacccgaagagatg
gccaagcagcgggccggcttcgaggagggcgcggtcaagaacggcgtcgacggcgagctg
gcgatgaagatcttcgatctggtggagaagtttgcaggctacggcttcaacaaatcccac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcg
gagttcatggcggcggtgatgaccgctgacatggacaacaccgacaagatagtgaccctg
gtggacgagtgccagcggatggggctgaccgtgatcccgccggacgtgaacaccggtcgc
taccgcttcagcgtcaacgaagatggtcacatcgtctacggcatcggtgcggtgaagggg
gtgggggaaggccccatcgatgcgatcctggaagcgcgggatagggacgggccgtttcgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcatcctctccggcgccatggaccggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcatgccaaggcgcaggcggtgggtcag
gtcgacatgttcggcgtgctcaccgaagagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcctgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcggcgagctgcgtcgttatacctcgggtcgt
ctgtgcgatctgcaccccacctcccgcgataccgtgaccacggccgcaggcttggtgatt
gcggcgcgcagcatggtgaccaagcgtggcaacaagatggggatctttaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaagtatgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcgatccgcatctctctcgatgaacagcagattgatgatcgttttttcccgcgtttg
tgcgagattttggaacccgcccgtgccggagtttgtccggttcaggtaaactatcgtcgc
cccggttcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgcttggacgagagcgggttgaattggtttttgattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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