KEGG   Acinetobacter haemolyticus: AHTJS_15060
Entry
AHTJS_15060       CDS       T04618                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ahl  Acinetobacter haemolyticus
Pathway
ahl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ahl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AHTJS_15060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahl03021]
    AHTJS_15060
   03400 DNA repair and recombination proteins [BR:ahl03400]
    AHTJS_15060
Enzymes [BR:ahl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AHTJS_15060
Transcription machinery [BR:ahl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AHTJS_15060
DNA repair and recombination proteins [BR:ahl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AHTJS_15060
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 DOCK-C2
Other DBs
NCBI-ProteinID: APR71537
UniProt: A0A1L6KR29
Position
complement(3070183..3074271)
AA seq 1362 aa
MAYSYTEKKRIRKNFGKLPHVMEAPYLLSIQVDSYRTFLQGGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVFVRIDRRRKLLATVILRALNYTNEQILNLFYEKVPVYLDMGSYQ
IDLVPDRLRGEMAQFDILDNDGKAIVEQGKRINARHVRQMEAANLAKLSVPDEYLYERIT
AEDITLKDGDVIPANTVLSHEVMVKIAEGGVKQFNILFTNDIDRGPFVADTLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHDDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEMVSVRHQGEFVRMSPERVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIASRGGAIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGTTKRGDKLSEDVLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSIEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDIHGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEQIDKMLQQQRTIAELRAFLDKIYNKVGGEQEDLDSLTDEEVLKLAGNLRAGVP
LATPVFDGAEESQIKELLELAELPRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggcatactcatataccgaaaagaaacggattcgtaagaattttggtaaattgccccac
gtaatggaagcaccgtacttactttcgattcaagtcgattcgtaccgtactttcttacaa
ggtggcaaaactccaaaaaatcgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctattgaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aaaccagagtttgacgtacgtgaatgtattttacgtggttcaacttatgcggcaccaatg
cgcgtaaaaattcgtttgatcattaaagatcgcgaaaccaaatcaattaaagacgttcgt
gaacaagaagtttacatgggtgaaatgccactcatgaccgataacggtacattcgttatt
aacggtactgagcgtgtaatcgtatctcaattacaccgttcgccaggcgtattctttgat
catgacaagggtaagacccactcaagcggtaaagtgttgtattcagcacgtattatccct
taccgtggttcatggttagatttcgaatttgatgctaaagatttagtattcgtacgtatt
gaccgtcgtcgtaaattattggcgactgtgattttacgtgctttaaattataccaatgag
caaatcctgaatttgttctatgaaaaagtacctgtctatttagatatgggcagctatcaa
attgatctcgttccagatcgcctacgtggtgagatggcgcaatttgatatcttagataac
gatggcaaagcgattgttgaacaaggcaaacgtattaatgcacgtcacgtacgtcaaatg
gaagcagcgaacttagcgaagctttcagtacctgatgaatacttgtatgagcgtattaca
gctgaagatatcacattgaaagatggtgatgtgattcctgcaaatacggtgcttagccat
gaagtgatggtgaaaatcgctgaaggcggcgtgaaacagtttaatattctgttcaccaac
gatatcgatcgtggtcctttcgttgcggatactttacgtgcagatacaacaacaggtcgt
gaagaagcacttgttgaaatctataaagtcatgcgtccaggtgagccgccaacgaaagaa
gctgctgaaaacttatttaataacttgttcttctcttctgagcgttatgacctgtctcca
gtgggtcgtatgaagttcaaccgtcgtttgggtcgtccatacgaagtgggtactgatcag
aagtctcgtgaagttgaaggtattttatcacacgacgatatcattgatgtacttcgtaca
ttggtggaaatccgtaacggtaaaggtgaagtcgatgatatcgatcacttaggtaaccgt
cgtgtacgttctgttggcgaaatgacagaaaaccaattccgtgttggtttagtgcgtgtt
gaacgtgctgttaaagagcgcttgagccaggcagaaacagataacttgtctccgcaagat
ttaatcaacgcaaaaccagttgctgctgcgatcaaagaattctttggttcaagccaatta
tctcagttcatggaccaaaacaacccattatctgagattacacacaaacgtcgtgtgtct
gcacttggtcctggtggtttgacgcgtgagcgtgcgggcttcgaagtacgtgacgtacac
caaactcactatggtcgtgtttgtccgattgaaacgcctgaaggtccaaacattggtttg
atcaactcgctttctgtgtatgcaaaagcgaacgacttcggtttcttggaaacaccgtat
cgtaaagttgtagatggccgtgtaacagatgacgttgaatacttatctgcaattgaagaa
gtagggactgtcattgcacaagccgactctgcagttgataaagatggtaatttaactgaa
gaaatggtttctgtgcgtcatcaaggtgaattcgtacgtatgtcgcctgaacgcgtaacg
catatggacgtttctgcacagcaggtagtatcagttgcggcatcattgattccattcctt
gaacacgatgatgcgaaccgtgcattgatgggttcgaacatgcaacgtcaggctgttcct
acattacgtgctgacaagccgcttgttggtacaggtatggaagcgaacgtagcgcgcgac
tcgggtgtgtgtgtgatcgcaagccgtggtggtgcgattgagtatgtagatgcatctcgt
atcgttattcgtgtcaacgaagatgaaatgattgcgggtgaagcaggtgtagatatctat
aacctgatcaaatatacacgttcaaaccagaacacatgtattaaccagaatgtcatcgtg
aacttgggcgacaaagttgctcgtggtgatatcttggctgacggtccttcgactgacatg
ggtgaacttgcgctgggtcaaaacatgcgcgtcgcgttcatgacatggaacggttataac
tatgaagactcgattttactttctgagcgtgttcttcaagaggatcgtttaacgtcgatt
cacattcaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgttggtgaagctgcactgtctaaattggatgagtcaggtattgtt
tatattggtgctgaagtaaccgcaggtgacatccttgttggtaaggtaacacctaaaggt
gaaactcagttaactcctgaagaaaaactgcttcgtgcaatctttggagaaaaagcggca
gacgtaaaagattcatctttgcgtgttccgtctggtaccaaaggtacagtgattgacgtt
caagtcttcacacgtgatggtttagaaaaggacgagcgtgctcaagcaattgagaaagct
caacttgatgcctaccgtaaagacttgaaagaagaatacaaaatcttcgaagaagcagca
cgtgaacgtattgttcgcttgttgaaaggtcaagagtcaaatggtggcggtacaaccaag
cgcggcgataaactctcagaagatgtattgtctggtttagagcttgttgatttacttgaa
atccaaccagctgatgaagcgattgctgaacgtttaacgcaaattcaagtgttcttgaaa
gagaagagcatcgaaatcgatgagaaatttgcagagaagaagcgtaagctttctacaggt
gatgaattaacaacgggtgtattaaaagttgttaaggtttaccttgcggttaagcgtcgt
attcagcctggtgataagatggcgggtcgtcacggtaacaagggtgtggtatcaaacatc
ttacctgtagaagacatgccgcatgatattcacggtgtgccagttgatatcgtattgaac
ccattgggtgtaccatcacgtatgaacgtgggtcagattcttgaaactcacttgggtatg
gcggcaaaaggtctgggtgagcaaattgataagatgctccaacagcaacgtacgattgct
gaattgcgtgcgttcctcgacaagatttacaacaaagttggtggcgaacaagaagatctt
gatagcttaaccgacgaagaagttttaaaacttgcaggtaacctgcgtgcaggtgtgcct
ttggcgacaccagtatttgatggtgctgaagaaagtcaaattaaagagttacttgagctt
gctgaattgccacgtactggtcaaaccgtattgtttgatggtcgtactggtgaacagttt
gatcgtcctgtaactgtcggttatatgtacatgctcaaattgaaccacttggttgatgac
aagatgcatgcgcgttcaactggttcttactcactagtgacacaacagccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacgcttcaagaaatgcttactgtgaagtcggatgacgttgaaggtcgt
acacgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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