KEGG   Atlantibacter hermannii: NCTC12129_03324
Entry
NCTC12129_03324   CDS       T05790                                 
Symbol
dacD
Name
(GenBank) penicillin-binding protein 6B
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
ahn  Atlantibacter hermannii
Pathway
ahn00550  Peptidoglycan biosynthesis
ahn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ahn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NCTC12129_03324 (dacD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ahn01002]
    NCTC12129_03324 (dacD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ahn01011]
    NCTC12129_03324 (dacD)
Enzymes [BR:ahn01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NCTC12129_03324 (dacD)
Peptidases and inhibitors [BR:ahn01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   NCTC12129_03324 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:ahn01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   NCTC12129_03324 (dacD)
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2
Other DBs
NCBI-ProteinID: VDZ74189
UniProt: A0A447LR59
Position
1:complement(2990308..2991150)
AA seq 280 aa
MVDRAIDSRRIAPDDVVTVGADASAYGNPVFAGSSLMFLKAGDRVTVHDLSRGLIVDSGN
DACVALADYIAGGEAPFVNMMNDYARKLNLRDTHFETVHGLDAPGQHSSAYDLAVLSRAI
IHGEPDFYHMYSERSLTWNGITQQNRNGLLWDKTLNVDGLKTGHTSGAGFNLIASSVDGQ
RRLIAVVMGAESPKGREEQARKLLLWGQSQFDTVQILHKGKKVGTERIWYGDREKIEVGT
DRDFWLSLPKSEVAHIKAKYVLDKPELESAAGRATAGRGN
NT seq 843 nt   +upstreamnt  +downstreamnt
gtggtggaccgcgccatcgacagccgtcggatcgcgccggatgatgtggtcaccgtgggt
gccgacgcctcggcctatggcaatccggtctttgccggttcttcgctgatgtttttaaaa
gcgggcgaccgcgtgacggtgcatgacctgagccgcggcctgattgtggattccggcaac
gatgcctgcgtggcactggcggattacatcgcaggcggcgaagcgccattcgtaaacatg
atgaacgactacgcccgcaagctgaacctgcgcgacacccattttgaaacggtccacggc
cttgacgcgccgggccagcacagttccgcttacgatctggcggtgctgtcgcgggcgatt
attcacggcgaacccgatttttatcatatgtacagcgaacggagcctgacgtggaatggc
atcacccagcagaaccgcaacggcctgctgtgggataagaccctcaatgttgacggcctg
aaaaccggccacacgtccggcgcgggatttaatctcatcgcatcaagcgtggacgggcag
cggcgtctgattgccgtggttatgggcgccgaaagcccgaaaggccgcgaggagcaggcg
cgtaagctgctgctatggggccaaagccagtttgataccgtgcagatcctgcataaaggg
aaaaaggtcggcaccgagcgtatctggtacggcgaccgcgaaaaaattgaagtgggcact
gaccgcgatttctggctcagcttgccgaagtcagaagtggcgcatatcaaagccaaatat
gttctcgataagcctgaactggaaagcgccgctggccgcgcaacagcgggtcggggaaat
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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