KEGG T05790: NCTC12129

Atlantibacter hermannii: NCTC12129_04803

Entry

NCTC12129_04803   CDS       T05790

Symbol

trmA

Name

(GenBank) tRNA (uracil-5)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

ahn Atlantibacter hermannii

Brite

KEGG Orthology (KO) [BR:ahn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahn03016]
    NCTC12129_04803 (trmA)
Enzymes [BR:ahn01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     NCTC12129_04803 (trmA)
Transfer RNA biogenesis [BR:ahn03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    NCTC12129_04803 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 MTS Cons_hypoth95 Methyltransf_11 Methyltransf_15 Methyltransf_31 Methyltransf_12 PrmA Met_10

Other DBs

NCBI-ProteinID:

VDZ75565

UniProt:

A0A447LUZ7

Position

1:4351422..4352528

AA seq 368 aa
MTPEHLPTEQYDAQLAEKVVRLQEMMAPFHAPAPEVFRSPLSHYRMRAEFRIWHDGDDLY
HIIFDQQTKQRIRVDSFPAASELINALMGAMIEGVRNNPVLRHKLFQIDYLSTQSNQAVV
SLLYHKKLDDEWQAQAAQLRDALRANNFNVHLIGRATKTKIALDQDYIDERLMVAGKEMI
YRQVENSFTQPNAAMNVQMLEWALDVTRDARGDLLELYCGNGNFSLALARNFRRVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLTSYQCETIFVDP
PRNGLDDETVKMVQAYPRILYISCNPQTLCQNLETLSQTHDVERLALFDQFPYTHHMECG
VLLSAKPR

NT seq 1107 nt +upstreamnt +downstreamnt
atgacgccagaacaccttcccaccgagcagtacgacgcgcaactggccgaaaaggtcgtc
cgtctgcaagagatgatggcgcctttccacgcgcccgcgccggaggtgttccgttcaccg
ctcagtcattacagaatgcgcgccgaattccgcatctggcacgacggcgacgatctgtac
cacattattttcgatcagcagaccaaacagcgtattcgggtggacagcttcccggcggcc
agcgagctgattaacgcactgatgggcgcgatgattgaaggcgtgcgtaataatccggtg
ctgcgccacaagctgttccagatcgattatctctctacccagagcaatcaggccgtggtg
tcgctgctgtaccataaaaagcttgatgacgagtggcaggcgcaggccgcgcaactgcgg
gatgcattacgcgctaataatttcaatgtgcatctgattggccgcgccacgaaaaccaaa
atcgccctcgaccaggattatattgacgagcgtctgatggtcgccggtaaagaaatgatt
tatcgccaggtggaaaacagctttacccagcctaatgccgccatgaatgtgcagatgctt
gagtgggcactggacgtcacccgcgatgcacggggcgatttgctggagctgtactgcggc
aacggtaacttttcgctggcactggcgcgtaatttccgccgggtgctggccacggaaatt
gccaagccgtctgtcgctgccgcgcaatacaatattgccgccaaccagatcgacaatgtg
caaattatccgcatggcggcagaagagtttacccaggcgatgaacggcgtacgggaattt
aaccggttgcaggggatcgatttaacaagctatcagtgtgagacgatctttgtcgatccg
ccccgcaacggactggatgacgaaacggtgaagatggtccaggcttacccgcgtattctg
tacatttcctgcaatccgcagacgctgtgccagaacctggaaaccctgtcgcaaacccat
gacgttgagcggctggcgttgttcgatcaattcccctacacccaccatatggaatgcggc
gtactgctcagcgcgaagccacgctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

Download RDF

DBGET integrated database retrieval system