KEGG   Antarctobacter heliothermus: ANTHELSMS3_00630
Entry
ANTHELSMS3_00630  CDS       T04983                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
aht  Antarctobacter heliothermus
Pathway
aht03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aht00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ANTHELSMS3_00630 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aht03021]
    ANTHELSMS3_00630 (rpoA)
   03400 DNA repair and recombination proteins [BR:aht03400]
    ANTHELSMS3_00630 (rpoA)
Enzymes [BR:aht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ANTHELSMS3_00630 (rpoA)
Transcription machinery [BR:aht03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ANTHELSMS3_00630 (rpoA)
DNA repair and recombination proteins [BR:aht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ANTHELSMS3_00630 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 Glyco_hydro_65C
Other DBs
NCBI-ProteinID: ASP19349
UniProt: A0A222DZG6
Position
complement(651023..652039)
AA seq 338 aa
MIHKNWAELIKPTQLEIKPGADPSRQATVVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSVTGKGPGVVTAGDIAE
TNGIEVLNREHVICHVDEGAEVYMEFTVNTGKGYVAADKNKPEDAPIGLIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTMKIETDGSITPEDAVAFAARILQDQLSIFVNFEEPESAN
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKLEDSF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgatccacaagaactgggcagaactgatcaagccgacgcagctcgagatcaaaccgggc
gccgatccgtcgcgtcaggcgacggtcgtggctgagccgcttgagcgtggctttggcttg
acgctgggcaacgccctgcgccgtgtgctgctgtcgagccttcagggcgcggccatcaca
agcgtgcagatcgataacgtgctgcacgaattctccagcgttgcgggtgtccgcgaggac
gtcaccgacatcatcctgaacctcaagggtgtgtcactacgcatggaagtcgaagggccc
aagcgcctgtccgtgaccggcaagggtccgggcgtcgtgaccgccggtgacatcgcagag
accaacggcatagaggtgctcaaccgcgagcatgtcatctgccacgtcgatgaaggtgcc
gaagtgtacatggagttcaccgtgaacaccggcaaaggctatgtcgccgccgacaagaac
aagcccgaggatgcacccatcggcctgatcccgatcgacgcgatctattcgccggtcaaa
aaggtcgcctatgacgtgcagccgacccgtgagggtcaggtgctggactatgacaagctg
accatgaagatcgaaaccgatggctcgatcacacctgaggacgccgtggcctttgccgcg
cgtatcctgcaggatcagctgtcgatcttcgtcaacttcgaagagcctgagtcggccaac
cgtcaggacgaagacgatggtctggagttcaatccgcttctgctcaagaaagtggacgag
ttggaactgtcggtccggtctgcgaactgcctgaagaacgacaatatcgtttatattggc
gatctgatccagaagaccgaagcagagatgctgcgcacgccgaactttggccgcaagtcc
ttgaacgagatcaaggaagtgctgtcgggcatgggtcttcaccttggcatggacgtcgag
gattggccgccggacaacatcgaagatctggccaagaagctggaagactcgttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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