KEGG   Actinomyces howellii: NCTC11636_00251
Entry
NCTC11636_00251   CDS       T06068                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ahw  Actinomyces howellii
Brite
KEGG Orthology (KO) [BR:ahw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahw03016]
    NCTC11636_00251 (rnd)
Enzymes [BR:ahw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     NCTC11636_00251 (rnd)
Transfer RNA biogenesis [BR:ahw03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NCTC11636_00251 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: VEG25880
UniProt: A0A3S4RE40
Position
1:complement(283824..285116)
AA seq 430 aa
MPTTPGPGRVPGTTDHPVPAEMVRDYRRPADGLPPVTDSPDGVRGVVASLQAGSGPVAVD
AERASGFRYGQDAYLIQLRRHGTGTVLIDPVTAGDLTGLADVLDGPEWVLHAADQDLPCL
AELGLRPRLLFDTELAARLLGRAHVGLGAVAEETLGLRLAKDHAAADWSTRPLPESWLVY
AALDVELLVPLREALGHELSAAGKDEWAAQEFEYVRTRPPRPSKTDPWRKTPRAGHAVRS
RRSLAVLREMWTTRERLAVDLDRSPSKILPHHALVAAAVARPSSRRKLASLKEFSSRQAR
QHMDLWWAALERALALPEEELPPLHAPLPDGELPRPRSWARHHAQAAAALEVVRLTVRER
AEAIRVPQELLLAPDTQRHLAWEIGEEHSAQGSADVRTEAVAARLVRLEARPWQVEQAAP
RLSAALAAFA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcccaccaccccgggtcccggcagggtcccgggcacgacagaccaccccgtccccgcc
gagatggtccgtgactaccgccgtcccgctgacgggctgccccccgtcaccgactccccc
gacggcgtgcgcggggtcgtcgcctccctgcaggccggcagcgggcccgtggccgttgac
gccgagcgggcctccggcttccgctacggtcaggacgcctacctcatccagctccgtcgc
cacgggaccgggacggtgctcatcgacccggtcacggccggtgacctgacggggctcgcc
gacgtgctggacgggccggagtgggtgctgcacgccgccgaccaggacctgccgtgcctg
gccgagctgggcctgcgcccacgactgctgttcgacaccgagctggcggcccgactcctg
ggccgggcacatgtcgggctgggcgccgtggccgaggagaccctcgggctgcgcctggcc
aaggaccacgccgcggcggactggtcgacccgccccctgcccgagtcctggctcgtctac
gccgccctcgacgtcgagctcctcgtgcccctgcgagaggcgctgggccatgagctctcg
gccgcgggcaaggacgagtgggccgcccaggagttcgagtacgtgcgcaccaggccacca
cgcccctcgaagaccgatccctggcgcaagaccccccgggcggggcacgcggtacgctct
cggcgatccctggcggtgctgcgcgagatgtggaccacccgtgagcggctcgccgtcgac
ctggaccgcagcccgtccaagatcctgccgcaccacgccctcgtcgcagcggcggtggcc
aggccgtcctcacggcgcaagctggcctccctcaaggagttctcctcccggcaggcgcgc
cagcacatggacctgtggtgggccgccctcgagcgcgccctggccctgcccgaggaggag
ctgcccccgctgcacgcccccctgcccgacggcgagctgccgcgcccccgctcctgggcg
cgtcaccacgcacaggcggctgcggccctcgaggtcgtccgcctcacggtgcgcgagcgc
gccgaggcgatccgtgtccctcaggagctgctcctggcacccgacacccagcgccacctc
gcctgggagatcggcgaggagcacagcgcccagggcagtgccgacgtcagaaccgaagcc
gtggccgcccgactggtccggctcgaggcccggccctggcaggtcgagcaggcggccccg
aggctctcggccgccctcgcagccttcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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