KEGG T02683: AHML

Aeromonas hydrophila ML09-119: AHML_10725

Entry

AHML_10725        CDS       T02683

Name

(GenBank) excinuclease ABC subunit B

K03702

excinuclease ABC subunit B

Organism

ahy Aeromonas hydrophila ML09-119

Pathway

ahy03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ahy00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AHML_10725
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahy03400]
    AHML_10725
DNA repair and recombination proteins [BR:ahy03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AHML_10725
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AHML_10725

SSDB

Motif

Pfam:

UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 DUF87 Kinesin UB2H Microtub_bd AAA_22

Other DBs

NCBI-ProteinID:

AGM43927

Position

2377930..2379942

AA seq 670 aa
MSKLFQLASQFQPAGDQPRAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDLINQRDILRRLAELQ
YTRNDIAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSLFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELKSRREQLLSLGKLVEEQRISQRTQFDIEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLADHEVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMQVAIEETERRRALQHAHNLEHGITPTGLNKSVGDVMDMG
GSRSAGKSGRGSRKAAEPQGEYHARSASEISKEIKRMEEQMFQHARDLEFEQAAALRDQI
QRLRNELIES

NT seq 2013 nt +upstreamnt +downstreamnt
atgagcaagttattccagctggccagccagtttcaacccgccggggatcagccaagggcc
atcgcccagctgctcgatggcatcgaatccggccttgcccatcagaccctgctcggggtg
accggctcgggcaagaccttcaccatggccaacgtcatcgccaccctcaatcgccccacc
atgatcctggctcccaacaagaccctggcggcccagctctatggcgagatgaaggagttc
ttccccgacaactcggtggagtatttcgtctcctattacgactactaccagccggaagcc
tacgtgccgaccaccgacaccttcatcgagaaggatgcctccatcaacgatcacatcgag
cagatgcggctgtcggccaccaaggcactgctggagcgccgcgatgtggtgatcgtcgcc
tcggtgtcggccatctacggtctgggagacccgcaagcctacctcagcatgatgctgcac
ctgaaagtgggggacctgatcaatcagcgggatatcctgcgccgtctcgccgagctgcag
tacacccgcaacgacatagccttccagcgcggcaccttccgggtgcggggggaggtgatc
gacatctaccccgccgaatcggacaagctggccctgcgggtggagctgtttgatgaggag
gtggagcgcctctccctgttcgatccgctgaccggtgccatcgagcagacggtggtgcgc
tacaccatctatcccaagacccactatgccaccccgcgcgagaccattttgggggccatc
gagcacatcaaggaggagctcaagagccgccgtgagcagctgttgtcgctgggcaagctg
gtggaggagcaacgcatcagtcagcgtacccagttcgacatcgagatgatgcaggagctg
ggctactgctcgggcatcgaaaactacagccgttacctctccggtcgcgcccccggcgag
ccgccgcccaccctgtttgactatctgccaggggacggcctgctcatcatcgacgaatcc
cacgtcacggtgccgcagatcggcgccatgttcaaaggggacagatcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaaccggccgctcaagttcgac
gagttcgaggcgctgatgccgcagacggtgtttgtctcggccacccccggcccctacgag
ctggagaagtccggcggcgatgtggtgcagcaggtggtgcgccccaccggcctgctcgac
cccgagatcgaggtacgtccggtcaccacccaggtggacgacctgctctccgagatccgc
aagcgggtggcggtggaggagcgggtgctggtcaccaccctcaccaagcggatggcggag
gatctgaccgaatacctggcggatcacgaggtaagggtgcgttatctgcactcggacatc
gacaccgtcgagcgggtggagatcattcgggacctgcgcctcggcaagttcgacgtgctg
gtggggatcaacctattgcgagaggggctcgatatgccggaggtctcgctggtggcgatc
ctggatgcggataaagagggtttcctgcgctccacccgctccctcatccagaccatcggc
cgggcggcgcgcaacctcaacggcaaggtcattctctacggggataccatcaccaactcc
atgcaggtggcgatcgaagagaccgagcggcgccgcgccctgcagcatgcccacaacctc
gaacatggcatcaccccgacggggctcaacaagtcggtgggagatgtgatggacatggga
ggcagtcgcagtgcgggcaagagcgggcggggcagccgcaaggccgccgagccgcaaggg
gagtaccatgcccgctccgccagcgagatcagcaaggagatcaaacggatggaagagcag
atgttccagcatgcacgggatctggagttcgagcaggcggcagcgctgcgggaccagatc
cagcggctgcgcaacgagttgatcgagagttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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