KEGG   Pseudalgibacter alginicilyticus: APS56_01665
Entry
APS56_01665       CDS       T04100                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
ahz  Pseudalgibacter alginicilyticus
Brite
KEGG Orthology (KO) [BR:ahz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahz03016]
    APS56_01665
Enzymes [BR:ahz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     APS56_01665
Transfer RNA biogenesis [BR:ahz03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    APS56_01665
 Prokaryotic type
    APS56_01665
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 PDEase_II
Other DBs
NCBI-ProteinID: ALJ06687
UniProt: A0A0P0DCK4
Position
420871..421776
AA seq 301 aa
MKLTILGCYSATPRVSTHTTSQVLEINNHMFLIDCGEGTQVELRRHKIKFNRIKHIFISH
LHGDHFFGLVGLISTFRLLTRETDLHIYGPKGIKEVITLQMKLADSWTNYNLIFHELSSD
SSELIFEDALVEVYTIPLEHRVYTNGYLFKEKEGERKLNIGAALDANIDKAYYNKLKQGF
DVKNEDGETIKNRLVTSKGDKPKSYAFCSDTVYKEDIIPVIKDVDVLYHESTFLDKHAHL
APKTKHSTAKQAASIAKHANAKTLILGHYSSRYDNLEDFRTEAKTVFENVKLAKDGKSFD
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaattaaccatattaggctgttacagtgctactccaagagtttcaacacatactaca
tctcaagtattggaaataaataaccacatgtttttaattgattgtggagagggtacacag
gtagaattacgccgacataaaattaagttcaatcgtattaagcatatttttatttcgcat
ttacatggtgatcattttttcggtttggtaggtttaatctcaacatttagactccttaca
agggaaacagatttgcatatttatggaccaaaaggtattaaagaggttattactcttcaa
atgaaattggcagattcttggactaattataatttgatttttcatgaattatcatctgat
agctctgaacttatctttgaagacgccttggttgaagtatataccattccattagagcat
cgtgtttataccaatggatatctgtttaaggaaaaggaaggagaacgtaagttaaatatt
ggagctgcattagatgccaatattgataaagcatattacaataaactcaaacaaggtttt
gatgttaaaaatgaagatggtgaaactataaaaaataggttagtaacatcaaaaggcgat
aagccaaaaagttatgccttttgtagtgataccgtttataaagaagatattataccagta
ataaaggatgttgacgtattgtatcatgaatctacttttttagataaacatgcacattta
gcaccaaaaacaaaacactctacagcaaaacaggctgcttctattgcaaaacatgcaaat
gcaaaaacacttattttaggacattactcttctcgttatgataatttagaagattttaga
acagaagcaaaaacggtttttgaaaatgtgaaattagccaaagacggaaaatcttttgat
ttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (83)   

Download RDF
DBGET integrated database retrieval system