KEGG   Pseudalgibacter alginicilyticus: APS56_15825
Entry
APS56_15825       CDS       T04100                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ahz  Pseudalgibacter alginicilyticus
Brite
KEGG Orthology (KO) [BR:ahz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahz03032]
    APS56_15825
   03036 Chromosome and associated proteins [BR:ahz03036]
    APS56_15825
   03400 DNA repair and recombination proteins [BR:ahz03400]
    APS56_15825
DNA replication proteins [BR:ahz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    APS56_15825
Chromosome and associated proteins [BR:ahz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    APS56_15825
DNA repair and recombination proteins [BR:ahz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      APS56_15825
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg 2-Hacid_dh MID_pPIWI_RE
Other DBs
NCBI-ProteinID: ALJ06512
UniProt: A0A0P0CUB9
Position
complement(3816799..3817071)
AA seq 90 aa
MNKTDLIDAMAEHAGITKAAAKKALECALIEIEGALQKGNRVSLVGFGSWSVSKRAAREG
RNPQTGATIKIKAKNVVKFKAGADLSSAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagatttaatcgacgcaatggcagaacacgcaggaattacaaaagctgct
gctaaaaaagctttagaatgcgcactaattgaaattgaaggagctttacaaaaaggcaac
agagtttctttagtaggatttggttcttggtcagtatctaaaagagcagcaagagaaggt
agaaacccacaaactggtgctacaatcaaaataaaagctaaaaacgttgttaagtttaaa
gctggagcagatttatcaagtgcagtaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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