KEGG   Acinetobacter indicus: CTZ23_09205
Entry
CTZ23_09205       CDS       T05342                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
aid  Acinetobacter indicus
Pathway
aid03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aid00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTZ23_09205 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aid03019]
    CTZ23_09205 (rhlB)
Enzymes [BR:aid01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CTZ23_09205 (rhlB)
Messenger RNA biogenesis [BR:aid03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CTZ23_09205 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 CMS1 UvrA_inter Glyoxalase Toprim
Other DBs
NCBI-ProteinID: AVH14445
Position
complement(1890401..1891552)
AA seq 383 aa
MSSGFETLNLHPKLRQAIAALGFKEMTPIQQKVLKFTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVKEQRFRGEPRALILAPTRELALQIESDAKELVKFTDLHVVTLLGGVDFDK
QKAQLDKNFVDIMVATPGRLIDFVEQKEVWLDQLEFLVIDEADRLLDMGFIPSVKRIVRF
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVSNSDKYK
LLQDILRDEPIEKVMIFANRRDQVRRLYDHLKRDGYKVVMLSGEIAQDKRLKMLDQFKNG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLAEDDA
FYLPEIEKAIGQKLPLTRLDGYC
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgtcatctggttttgaaaccttaaatttacatccgaaactgagacaagctattgcggcc
ttaggttttaaggaaatgacgcccattcagcaaaaggttttaaaatttactttggctgga
catgatgccattggtcgcgcccagaccggtaccggcaaaactgctgccttcctcattagc
gtaatcaatgacttattgaataatccggtgaaagagcagcgtttccgtggtgagccgcgt
gccctgattctggcaccgacccgtgaactggccttacagattgaaagcgatgccaaagag
ctggtgaagtttaccgacttgcatgtggtgaccttgttgggcggtgtcgattttgacaag
caaaaagcgcagctggataaaaactttgtcgacattatggtcgcgaccccgggccgtctg
attgactttgtagagcaaaaagaagtctggctggatcagctggaatttctggtgattgat
gaagccgaccgtttactggatatgggctttattccatcggtaaaacggattgtgcgtttt
tcaccgcgtaaagagcagcgccagaccttaatgttctcagccacttttagctacgatgtg
ctgaatctggcccagcaatggttatttgaaccggtgactgtcgaaattgaaccggaaaag
aaaaccaatgccgatgtcgaacagcgcgtatatatggtgtcgaactcagacaaatataaa
ctgctgcaagatattctgcgcgatgagccaattgaaaaagtcatgatttttgccaaccgc
cgcgatcaggtgcgtcgtctgtatgaccatctgaaacgtgatggctataaagtagtgatg
ctatccggtgaaattgcccaggacaaacgcctgaaaatgctggaccagtttaaaaatggc
aagcacaacatcatgattgccaccgatgttgccggacgcggcattcacgtcgatggcgta
tcgcatgtggtgaactttaccttgccagaacagtcagatgactatgtacaccgtattggc
cgtactggtcgtgccggcacgcgcggggtgagtatcagtttcctagccgaagatgatgct
ttctatttgccagaaattgaaaaagccatcgggcaaaaattgccattaacccgtttagat
ggttattgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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