KEGG   Arachis ipaensis: 107608737
Entry
107608737         CDS       T04301                                 
Name
(RefSeq) DNA repair protein RAD4 isoform X2
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
aip  Arachis ipaensis
Pathway
aip03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107608737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aip03400]
    107608737
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107608737
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 107608737
NCBI-ProteinID: XP_016165935
Position
B07:complement(13961312..13969139)
AA seq 918 aa
MRRRSQRKGQSSVSENEPRSQQDSEGTLAEISREAVGKLLQRANKVGGRRRKMMLESETE
QNGTHILEQILQPKTSEVGHNHRNPIGSTSAEEKCNNESIDQGYLNDKGELDDSDWEEGT
IPVDDSPVTIEFDVTPDPAVKKQVRRASAKDKDLAELVHKVHLLCLLARGRLIDSACDDP
LIQASLLSLLPAHLLQLSNVTKLTSRALHPLISWFHDNFHVRNYTNAEASLHFALSSALE
SREGSPEEIAALSVALFRALNFTTRFVSILDVASLKPNQSMGSDAGRSSKGIFNTSTPMV
SKKKLDFNSTRKSLTNEKEKVCESSCGNSRRSKKGRAKSQVSESNNPPTAENLNDSVSKS
QTSETQDKNSKPCLSEQSCRSKRKGDLEFEMQLQMALSATAVGSLNSKLESDTNDDAANV
SSPSKKMKRDISGESSTPPQVISTALGSKKVGSPLYWAEVYCSEENLTGKWVHVDVVNSI
IDGEDKVEAMAAACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIASERVNSMWWDSVLAPL
RDLESGATGGVVPSRTNHITSTQSNMSDSFVPTRSSLEDIELETRALTEPLPTNQQAYKA
HPLYAIERWLTKYQVLHPKGPILGLCGGFHVYPRTCVQTVKTKERWLREGLQVKANELPV
KELKPSVKTQNLQDFEADDYECTDSKENIKLYGSWQLEPLNLPHAMNGIVPKNERGQVDV
WSEKCLPPGTVHLRFPRAFSIAKKLEIDYAPAMVGFEFKNGRSYPVFDGIVVCAEFKDVL
LEAFAEEEQRRQAEEKRRDEAEALRRWYQLLSSIVTRQRLKNRYNNGLSSEILTEVQHVN
DKESNATVSDSYDKNQTPKNQQVTTSKNDSGLDLEALVSTPGKAHEHVFLKEYESFDEGA
SLLTKRCQCGFSVQVEEL
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcgacgaagaagccagcggaaggggcaatcctcagtctcagaaaatgaaccaagatca
caacaagattcagaaggaactttggcggaaatatcaagggaggcagtggggaaactttta
cagcgtgctaataaagttggtggcaggaggagaaagatgatgctggagtctgagacggaa
caaaatggaactcacatattggaacaaattctccaaccgaagacttcagaggttggacat
aatcatagaaatcccataggaagtacttctgcagaggagaaatgtaataacgaaagtata
gaccaaggatacttgaacgacaagggcgaactagatgactcagactgggaagagggtacc
attcccgtggatgatagtcctgtgactattgaatttgatgtgactccggatccagctgtg
aagaaacaagttcgtcgtgcttctgccaaggataaggacttggctgaacttgtacacaag
gttcatttgctttgtttacttgctcgtggaaggttaatagatagtgcttgtgatgatcct
cttattcaggcttctttgctttctctactcccagcacacttgctccagttgtcaaatgtc
acaaaactcacatcaagagctctacatcctttaatttcatggttccatgataactttcat
gttcgaaactatacaaatgcagaagcatcactacactttgctttgtcatcagctttagaa
tcacgtgagggtagtcctgaagagattgcagctttatcagttgcactgtttagagctttg
aattttacaaccaggtttgtatccattttggatgttgcatctctcaaaccaaatcaatcc
atgggatcagatgcaggtagatccagtaaggggatatttaatacttcaacaccaatggtg
tctaagaaaaaattggattttaattcaacacgaaaatcattaaccaatgagaaagaaaaa
gtctgtgaaagctcttgtgggaattcacggagaagtaaaaaaggtcgtgcaaaaagccaa
gtgtctgagtctaacaatcctcccactgctgaaaacttgaatgatagtgtgtccaagtca
caaacttctgagacacaagataagaactccaaaccgtgtctttctgaacaatcttgtaga
tcaaagagaaaaggggatcttgaatttgagatgcagttgcaaatggctctttctgctaca
gcagttggatccttgaatagtaaattggagtcggatacaaatgatgatgcagcaaatgtt
tcttctccatcaaaaaaaatgaagagagatataagtggagaatcttcaacgccccctcaa
gtaatttccaccgcactaggatcaaaaaaagtaggatcacctctgtattgggcagaagta
tattgcagcgaagagaatttgacaggaaaatgggtgcatgttgatgtcgtgaattctatt
attgatggggaggacaaggttgaagctatggcagctgcatgcaaaacatctttgagatat
gttgttgcctttgctgggcagggggccaaagatgtgacccgcaggtattgcatgaaatgg
tataagatagcatcggaacgagttaattcaatgtggtgggattcagtattggcaccgctg
agggacctggaatcgggggcaactggaggtgtggttccttcaagaacaaaccacatcact
tctacacaatccaacatgagtgactctttcgtacctacacggagctctcttgaggatatt
gagttggaaactagggcattaactgagcctcttccaactaaccagcaggcctacaaagct
catccactttatgccatagaaagatggcttacaaagtatcaagtacttcacccaaagggt
ccaattctgggcttatgtggaggtttccatgtttaccctcggacttgtgtgcaaactgtt
aagacgaaagagagatggctcagggaaggactgcaagttaaagccaatgaactgcctgtg
aaggagcttaaaccttccgtgaagacccagaacttacaagattttgaagctgatgactat
gagtgcactgattctaaggaaaatattaaactttatgggagctggcagttggaaccatta
aatttgcctcatgctatgaatgggatagtacctaagaacgaacgtggtcaggtagatgtt
tggtctgagaaatgtcttccaccagggaccgtgcacctgagatttccaagggcgttttca
attgcaaagaagctagaaattgattatgctcctgctatggttggttttgaatttaaaaac
gggcgttcataccctgtctttgatggtattgtggtgtgtgccgagttcaaggatgtactg
ttagaggcatttgccgaggaagaacaaagacggcaggcagaagagaagagaagagatgaa
gctgaggctcttcgtcggtggtaccagctgctttcatctatcgtaacgcgccaaaggttg
aaaaatcgatataataatggtttgtcatcagagattttgactgaagtccaacatgtgaat
gataaggaatcaaatgccacagtgagtgatagttatgacaagaatcagactcccaaaaac
cagcaagtaaccacaagcaagaatgatagcggtctcgatctcgaggctttggtaagtact
cctggtaaagcacatgagcatgtgtttttgaaagagtatgagagctttgatgagggagcc
tctctattaacaaaacgatgccaatgtggattttcagtccaagtagaagaattgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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