KEGG   Arachis ipaensis: 107608747
Entry
107608747         CDS       T04301                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
aip  Arachis ipaensis
Pathway
aip03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107608747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107608747
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     107608747
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD dsrm HA2_N AAA_19 NACHT nSTAND3 AAA_22 T2SSE ATPase AAA_14 Zeta_toxin Dicer_dimer
Other DBs
NCBI-GeneID: 107608747
NCBI-ProteinID: XP_016165952
Position
B07:30319597..30337971
AA seq 1083 aa
MPSQPEEASSRPSASLANDIAVEWKQKLITLLDDESKQELISREKKDRREFQQIAALASK
MGLYSHVYAKVVVISKVPLPNYRPDLDDRRPLREVSIPISMLRRVDAYLEEYQTQKSRMK
ETFPDLSFARSTNNDSIGVDERLFEKPQLPALNKAALEKILRQRSLQMRDQQQAWQESAE
GRRMLEFRRSLPAYKEKEAILSTILRNQVVIISGQTGCGKTTQLPQFILECEIESLQGAA
CNIICTQPRRISAISVSERVALERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRL
IADRKLKDVTHIIVDEIHERGMNEDFLLIVLKDLLPRRPEMKLILMSATLDAELFSSYFN
GAAIIKIPGFTHPVRTCFLEDVLELSGYRLTPDNQIDDYGQERIWKMNKQAPRKRKSQIA
SVVEDSLREADFKDYDPQTRESLSCWNPDCMGFNFIEYILCHICEDERPGAVLVFMIGWD
DISALKEKLLLHPLLGDQSRVLLLICHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI
TINDVVFVLDCGKEKESSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGECYHLYPRC
VYDAFAEYQLPEILRTPLQSLCLQIKSLKLGPISEFLSKALQSPEILAVQNAIEYLKIIG
AFDDNENLTLLGHYLTMFPMEPKLGKMLILGAIFNCLDPILTVTASLSVRDPFLAPLDQK
DVAAAAKSQFSHDYSDHLALVRAYDGWKDAEIDLAGQEYCWANFLSSQSMKAIDALRMEF
LSLLKDIGIVDSNATNCNAWSYDVHLIRAVIFYGLYPGICSIVHKEKSFSLKTMEDGKVH
LHLNSVNARESKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGKISKDGDGQLKML
GGYLEFLMKPAVAEMFQSIRRKLDDIIQSKLLFPMMGIHLFHELLSAVRLLISKDKCEGR
FVFSCQVIKPSKPSVMTLQPALVSRTDSGPGGDNSKGQLQTLLARAGCAAPIYKTMQIQN
NQFQAAVEFNGIQIMGQPCHNKRTAEKDAAAEALQWLMGKRQAENEYMDHNAVMLKKSKR
DHN
NT seq 3252 nt   +upstreamnt  +downstreamnt
atgccttctcaaccggaagaggcttcgtcacgtccaagtgcttcccttgcgaatgatatt
gctgtggagtggaagcagaaattaatcacacttttagatgatgagagtaagcaagagttg
atctcgagagagaagaaggataggcgtgagttccagcaaatagcagctttggcaagcaaa
atgggattgtacagccatgtgtatgcaaaagttgttgtcatcagtaaggttccacttccc
aactacagacctgatttggatgatcgacgtccgctgagggaggtaagcatacctatttct
atgttaaggcgagttgatgcttatcttgaagaataccaaacccaaaaatccagaatgaag
gaaacttttccagatttgtcatttgcaagatcaacaaataacgatagtattggtgtggat
gaaaggttatttgagaaacctcagttgccagcattgaataaggctgctttggagaaaatt
ctccggcagagaagcttgcaaatgcgtgatcagcaacaagcttggcaggagtcggcagaa
ggtagaagaatgctagaatttcgtagaagtctccctgcttataaagagaaggaagcaata
ttgtcaacaatattgaggaatcaggtggttatcatttcgggacaaacaggatgtgggaag
acaacacaactcccacagtttattttagaatgtgagatagaatctcttcagggagctgct
tgtaatatcatatgcacacaaccaaggcgcatatcagcgatatctgtttctgagagggtt
gcgcttgagagaggggagaaattgggtgaatctgttggatataaggttagattggagggt
ataaaagggagagataccaggcttctcttttgcacaacaggcatcttattaagaagatta
atagctgatagaaaattaaaagatgtaactcatattattgtggatgaaattcatgagcgt
gggatgaatgaagattttcttctcattgtccttaaagatctcctacctcgccgaccagaa
atgaaactgattttaatgagtgctacccttgatgcggagctcttctcctcatactttaat
ggagctgcaataatcaagattccgggtttcacgcaccctgtcagaacctgttttttggag
gacgttttggaattgtcaggctacagattgactcctgataatcaaattgatgattatggt
caagaaaggatttggaaaatgaacaaacaggcccctagaaaaaggaaaagccaaattgct
tctgttgtagaggattctttaagggaagctgatttcaaagattacgatccacaaacacga
gaatctttgtcatgttggaatcctgattgcatgggttttaacttcatagaatatatttta
tgccatatatgtgaggatgaaaggccaggtgctgtgttggtttttatgattggatgggat
gatataagtgcactgaaagagaagctccttttacatcctcttttgggagatcaaagccga
gttttgcttcttatatgccatggatcaatggcaagctctgagcagagattaatatttgaa
gaacctgaagatggagtgcgaaaaatagtgttagcaacaaatattgctgaaacgagtatc
acaataaacgatgttgttttcgttcttgactgtggaaaggaaaaagaatcatcatatgat
gctcttaataacacaccttgtttgcttccaacctggatctctaaggtttctgcccaacaa
agaagaggaagagctggtcgagttcaaccaggagaatgttaccatctctatcctagatgt
gtttatgatgcttttgcagagtatcaattgccggaaattttgagaacacctttgcaatct
ctctgcttgcaaattaaaagtttaaaacttggaccgatatcagagttcttgtctaaggca
ttacagtctccagagattcttgcagtgcaaaatgcaattgaatatttaaaaataattgga
gcttttgatgacaatgagaatctgactcttctagggcactacctgacaatgtttccgatg
gaacccaaactagggaagatgcttatattgggtgctatcttcaattgcctggatcccata
ttaactgtcactgccagcctgagtgtgagagatccatttctagcaccgttggaccaaaaa
gatgttgcagctgcagcgaagtctcaattctcccatgattatagtgatcatcttgccctt
gtgagggcttatgatggctggaaagatgctgaaatagacctcgctggacaagaatactgc
tgggcaaatttcctttcttcacaatccatgaaagctattgatgcccttcggatggaattc
ttatcccttctcaaggatattggaatagttgatagcaatgcaacaaactgcaatgcgtgg
agctatgatgtgcatcttatacgagcagttattttttatgggctatatcctggaatttgc
tctattgtgcataaagagaagtcattttctctgaagacaatggaggatggtaaagtgcat
cttcatttgaattcagtgaatgctcgagaaagcaaaattccatatccgtggcttgttttt
aatgagaagataaaagtgaattcggtgttccttcgtgactcaactgctgtgtctgactca
gtggtgcttctttttggtggaaagatctcaaaagatggtgatggtcaattaaaaatgtta
ggagggtatctggagttcttaatgaaacctgctgttgctgaaatgtttcagagcataagg
aggaaactagatgacatcattcagagcaaactactgtttccgatgatgggaatacactta
tttcacgagctgctttctgctgtacggttgctgatttccaaagataaatgtgagggcaga
tttgtgtttagctgccaggtcattaaaccatcgaaaccatctgtgatgaccttgcaacca
gcattggtttcaaggacagacagtggacctggtggcgataattctaaaggtcagctccaa
actcttctggctcgtgctggatgtgctgcacccatctacaagactatgcaaatacagaac
aatcagtttcaggctgcggtcgagtttaatggtatacagataatgggccaaccttgtcac
aataaaaggactgcggaaaaagacgccgcggctgaggcactgcaatggcttatgggtaaa
agacaggcagaaaacgagtacatggatcacaatgcagtgatgctaaagaaaagcaagagg
gatcataattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (36)   

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