KEGG   Arachis ipaensis: 107609795
Entry
107609795         CDS       T04301                                 
Name
(RefSeq) sm-like protein LSM6A
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
aip  Arachis ipaensis
Pathway
aip03018  RNA degradation
aip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107609795
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107609795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107609795
   03041 Spliceosome [BR:aip03041]
    107609795
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107609795
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107609795
Spliceosome [BR:aip03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107609795
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 107609795
NCBI-ProteinID: XP_016167309
Position
B07:9867454..9869380
AA seq 97 aa
MSGVEKEKEKEKGSSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQ
TEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLAEGA
NT seq 294 nt   +upstreamnt  +downstreamnt
atgagtggagtagagaaagaaaaagagaaggagaaaggatcatcaggaaccactaaaacc
cctgccgatttcctcaaatccattcgcggccgccccgttgtcgttaagctcaattccggc
gttgattatcgtggtatcctagcttgtctagatggctatatgaatattgcaatggaacag
acagaggagtatgtcaatggccaactgaagaacaaatatggcgacgccttcattcgaggg
aataatgttctgtacattagtacttcaaagaggactctagcagaaggagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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