KEGG   Arachis ipaensis: 107625027
Entry
107625027         CDS       T04301                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1 isoform X1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
aip  Arachis ipaensis
Pathway
aip03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107625027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aip03009]
    107625027
Enzymes [BR:aip01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     107625027
Ribosome biogenesis [BR:aip03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107625027
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 107625027
NCBI-ProteinID: XP_016183030
Position
B02:complement(18322848..18328289)
AA seq 292 aa
MFTPCANSKLKHKRDKKQTETQCWEEEEQENHGNKILEDPSLKGGLIKKTKLQECDESMG
PEEDGTTMMGLAGIPVAPCYRGSKGGIYFVLQNASLVAAYVGKRYQILNPDEHANFLRRK
NKNPYDYRPDIVHEALLQIMGSRLCMAGRVHGVFIKTDEGILIRVEPNTQIPKTLGSFCN
MMAELLQKFSIKSKGNRGKLLRLIENPVTQHLPVNSRKIGLSVSSPKAVQINDYVAAANH
DENLVFVVGAMAHGKIDAEYVDDLISVSALPLSAGTCLRRICVALERNQKIH
NT seq 879 nt   +upstreamnt  +downstreamnt
atgttcactccttgtgcaaacagtaagctgaagcataagagggataaaaaacaaactgaa
acccaatgttgggaggaggaagagcaagagaatcatggtaacaagatccttgaagaccct
tctctcaaggggggtcttattaaaaagacaaagcttcaggagtgtgatgaatcaatgggg
cccgaagaagatggtactacaatgatggggcttgcaggaattcctgtagcaccttgctac
cggggatcaaaaggtggaatctattttgttcttcaaaatgcctcgctggttgctgcttat
gttgggaagaggtatcagattttgaatccagacgagcatgccaatttcctgcgaaggaaa
aacaagaacccctatgattataggcctgatattgtgcatgaggcccttcttcaaattatg
ggtagtaggctttgcatggccggtagggtacatggtgtattcattaaaactgatgaagga
atacttatccgagtggaaccaaacacccagataccaaagactctgggaagcttttgcaac
atgatggctgagctactgcaaaagttcagcatcaaatcaaagggtaatcgtggaaaactt
ttgcgcctaattgaaaatcctgtaactcaacacttacccgttaactctcgtaagattggg
ctttccgtcagttcacctaaggctgttcaaattaatgactatgtcgccgctgccaatcat
gatgagaaccttgtgtttgtggttggtgcaatggctcatggaaagatagatgctgaatat
gttgatgatcttatatcagtttctgcattgcccttgagtgctgggacatgtctgagacgt
atctgtgttgcgttggagaggaatcagaagattcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system