KEGG   Arachis ipaensis: 107625321
Entry
107625321         CDS       T04301                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aip  Arachis ipaensis
Pathway
aip03040  Spliceosome
aip04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107625321
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107625321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aip03041]
    107625321
   04121 Ubiquitin system [BR:aip04121]
    107625321
   03400 DNA repair and recombination proteins [BR:aip03400]
    107625321
Enzymes [BR:aip01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107625321
Spliceosome [BR:aip03041]
 Complex B
  Other components
   Prp19 complex
    107625321
 Complex C
   Prp19-CDC5 complex
    107625321
Ubiquitin system [BR:aip04121]
 Ubiquitin ligases (E3)
  U-box type E3
   107625321
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107625321
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 WD40_like RMC1_N U-box zf-Nse PROPPIN eIF2A PAS_11 V_ATPase_I_N
Other DBs
NCBI-GeneID: 107625321
NCBI-ProteinID: XP_016183424
Position
B02:58291302..58301760
AA seq 524 aa
MNCSISGEVPEDPVVSKKSGLLFEKRLIETHIADYGKCPITGEPLTLDDLVPIKTGKIVK
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLATAERPFPVSANAIPANVSGLSNGKRAAEDDEMAHGGKKMHPGITSAIISE
LTDCNAALSQQRKKRQISTTLAPVESIEAYTQISSHPFHKTNKPGITSLDILYSKDLIAT
GGIDMNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESLLTSSADKTVRVWQGSEDGNY
NCKHILRDHTAEVQAVTVHATNNYFVTASLDGTWCFYDLSSGTCLTQVADTSGSSEGYTS
AAFHPDGLIIGTGTTDALVKIWDVKNQSNVAKFDGHTGSVTAISFSENGYFLATAAHDGV
KLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKTF
PDLSGTGKVTCVKFGPDSKYIAVGSMDRNLRIFGQPSEDTPTES
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgaactgctccatttccggcgaggtgccggaagacccagtggtgtctaagaaatccggt
cttctttttgagaagcggttaattgagacgcacatagcggattatggaaaatgtccaata
actggagaaccccttacgttggatgatcttgtaccaatcaaaacaggcaagatagtgaag
cccagaccagtgcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg
gatgggttgatgctatctaattttgcattggagcaacaattgcacacagccaggcaagag
ctaagtcatgctttatatcagcatgatgctgcatgtcgagtgattgcaagacttaaaaag
gaacgagatgaagctaggtcattgcttgcaacagcagaaaggccattcccagtgtcagcg
aatgctataccggcaaatgtctctggcttgagcaatgggaaaagagctgctgaagatgat
gagatggcacatggtggaaagaaaatgcatcctggaataacttctgcaataatttctgag
ctaactgactgcaatgctgctctttcccagcagaggaaaaagcgacagatttctacaaca
ttggctcctgttgaatctatagaggcttatacccagatatctagccaccccttccacaaa
acaaacaaaccgggcattacatctcttgacatcctgtattctaaggacttaattgcaact
ggcggtattgatatgaatgctgttatttttgacagaccatcaggacaaatattatctaca
ctcagtggtcattctaaaaaggtaaccagcgtaaagtttgtagctcagggcgaatcgtta
ttaaccagttcagcagataagacggttcgtgtgtggcaaggctcggaggatggtaactat
aactgcaaacacatcctgagggatcatacagctgaggtacaagctgtcactgtccatgcc
accaataactactttgtgactgcttcacttgatggcacttggtgcttttatgatctgtct
tcaggaacatgtctgactcaggttgcagacacttcaggttcttctgaaggctatacttct
gcagcttttcatcctgatgggctcattattggaactggcaccacagatgctcttgttaag
atctgggatgtaaaaaatcagtcaaatgttgctaaatttgatggacatacaggatcagta
actgccatatccttctctgagaatgggtacttccttgcgactgcagctcatgatggtgta
aagctttgggatctacgcaaattaaagaacttccgaaattttgctccgtatgactcagaa
actccgacaaactcagttgagttcgatcacagtggatcttaccttgcagttgcaggctct
gatatcaggatttaccaagtcgcaaatgtgaaatctgaatggaactgtatcaaaactttc
ccagatttatctggaacagggaaagtcacctgtgtaaaatttggtccagattcaaaatac
atagcagtggggtcaatggatcggaatcttcgaatatttggccaacctagtgaagatact
ccaaccgagtcgtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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