KEGG   Arachis ipaensis: 107625644
Entry
107625644         CDS       T04301                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
aip  Arachis ipaensis
Pathway
aip03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107625644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107625644
   03041 Spliceosome [BR:aip03041]
    107625644
   03032 DNA replication proteins [BR:aip03032]
    107625644
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107625644
Spliceosome [BR:aip03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107625644
  U2 snRNP components
    107625644
 Complex B
  U1 snRNP components
    107625644
  U4/U6.U5 tri-snRNP components
    107625644
 Complex C
  U2 snRNP components
    107625644
DNA replication proteins [BR:aip03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107625644
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 107625644
NCBI-ProteinID: XP_016183825
Position
B02:complement(89011042..89012802)
AA seq 131 aa
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGRTSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGA
APGRGVPPVRR
NT seq 396 nt   +upstreamnt  +downstreamnt
atgagtagaagcttgggaattccagtgaagcttcttcacgaggcttcgggtcacgttgtc
accgttgagctcaaaagcggagaactctaccgtggcagcatgattgagtgtgaggacaac
tggaactgccaactcgagagtatcacttacactgcgaaggatggaaggacatcgcaactt
gagcatgtgtttattcgaggaagcaaagttaggtttatggtcataccagacatgcttaaa
aatgctcctatgtttaagcgcttggatgcaagaattaagggcaagggtgcatctctgggt
gttggtagaggccgagcagttgcaatgcgagcaaaggctcaggctgctggccgtggagct
gcacctggaaggggtgtaccacctgtccgcaggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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