KEGG   Achromobacter insolitus: BUW96_00480
Entry
BUW96_00480       CDS       T04671                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
ais  Achromobacter insolitus
Pathway
ais03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ais00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BUW96_00480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ais03019]
    BUW96_00480
   03016 Transfer RNA biogenesis [BR:ais03016]
    BUW96_00480
Enzymes [BR:ais01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BUW96_00480
Messenger RNA biogenesis [BR:ais03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BUW96_00480
Transfer RNA biogenesis [BR:ais03016]
 Prokaryotic type
  tRNA degradation factors
   BUW96_00480
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1 OB_Dis3 HTH_20 HTH_IclR Rrp44_S1 MarR_2 HTH_11
Other DBs
NCBI-ProteinID: APX73534
Position
99051..101528
AA seq 825 aa
MAKRSNNESNNNRSTPLPEAPPDFDPDVPSREAILKALRAAGSPLSPVELAERMGVERAA
TMVGFERRLGAMERDGQLMPNRKGVLLLATKLDFIAGKVLGHRDGFGFLLRDDGGPDLFL
SPREMLKVLHGDRVLVKPSGEYRGKPEGTIVEVIERRTNKLVGRFLHEHGLSIVVPEDQR
IKHDILIPPSDTNGAQHGQVVAVEIMEQPTRHTQPLGRVAEVLGEIDDPGMEIEIAVRKF
DVPVEFSEAALKQAARLPDVVRKADLKDRVDLRDVPLITIDGEDARDFDDAVYCEPVELG
TGQRKRPGWRLLVAIADVSHYVRPGDALDDDAIERGTSVYFPRRVIPMLPESLSNGLCSL
NPDVDRLVLVCDMVIPASGAKAGTVTAYQFYNAVMHSHARTTYTNIWAALQQPGGPAAHA
MRSVMPQVQHLYELYQLLAQGRKKRGAIDFDTVETKIVCNELGRIEQIVPSVRNDAHKLI
EECMLAANTCAADFMTRSKHPGLFRIHEGPTPERLQSLREFLRTMGLSLGGGETPTAKDY
GDFLDSVRGRPDYQLLQTMCLRSMQQAVYSPDNMGHFGLSYPGYSHFTSPIRRYPDLLTH
RVIKALLAAERYVPSLEDQPVVIGRTQREHEHAIWEKLGLVLSASERRADEASRDVEAWL
KCWFVKERVGEDFSGTVTGVASFGIFVTLDTLHVEGLVHVSELGGEYFQFNDALHELRGE
RTGMRYRLTDKVQVQVSRVDLEARRIEFRLVQGTSFDALRKASARGPDEPSRRVKKAASP
KPAALKGQTAKERRAEAKKASKPPRAPKKAPKRAAPAKKATHKRH
NT seq 2478 nt   +upstreamnt  +downstreamnt
ttggcaaaacgatcgaataacgaatcgaataacaacagatcaacacccttgcccgaagcg
ccgccggacttcgatcccgatgtcccgtctcgtgaagccatcctgaaagcgctgcgcgcc
gccggctcgccgctgtctcccgtggaactggccgaacgcatgggcgtcgagcgcgccgcg
acgatggtggggtttgaacgccgcctgggcgccatggagcgcgacgggcaattgatgccc
aatcgcaagggcgtgctgctgctggccaccaaactggacttcatcgccggcaaggtgctg
gggcaccgcgacggcttcggctttctgctgcgcgatgacggcgggcccgatctgttcctg
tcgcctcgcgaaatgctcaaggtgctgcatggcgaccgcgtgctggtcaaaccctccggc
gaataccgcggcaagcctgaaggcactatcgtcgaggtcattgaacgccgcaccaacaag
ctggtgggacgctttctgcacgagcatggcctgtccatcgtcgtccccgaagaccagcgc
atcaagcatgacatcctgattccgcccagcgacaccaacggagcccagcatgggcaggtg
gtcgctgttgaaatcatggagcagcccacgcgccacacgcagccgctgggccgcgtggcc
gaagtgctgggcgagatcgacgatcccggcatggaaatcgagatcgcggtgcgcaagttc
gacgtgccggtcgagttttcggaagctgcgctcaagcaggccgcgcgcctgccggacgtg
gtccgcaaggccgatctcaaggatcgcgtggacctgcgcgacgtgccgctcatcacgatc
gacggcgaagacgcgcgcgacttcgacgacgctgtgtactgcgaacccgtcgagctgggc
acgggccagcgcaagcgtccgggctggcgcctgctggtggccatcgccgacgttagccat
tatgtgcgtccgggcgatgcgctggatgatgacgcgatcgaacgcggcaccagcgtctac
tttccgcgccgcgtcattccgatgctgccggaatcgttgtccaacgggctgtgttcgctc
aacccggacgtcgaccgcctggtgctggtctgcgacatggtcatcccggccagcggcgcc
aaggcgggaacggtcacggcttaccagttctacaacgcggtcatgcactcgcatgcgcgc
accacctacaccaacatctgggccgcgctgcagcagcccggcggtccagccgcgcacgcc
atgcgcagcgtcatgccgcaggtccagcatctgtatgagctctaccaattgctggcgcaa
gggcgcaagaagcgtggcgccatcgacttcgacaccgtcgagaccaagatcgtctgcaac
gaactcggccgtatcgagcaaatcgtgccatcggttcgcaacgatgcgcataagctgatc
gaggaatgcatgctggccgccaatacctgcgcggccgacttcatgacccgcagcaagcat
cctggcctgttccgcatccacgaagggccgacgcccgaacgcctgcagtcgctgcgtgaa
ttcctgcgcaccatgggcctgtcgctgggcgggggcgagacgcccacggccaaggactac
ggagacttcctggattcggtgcgcggtcgccctgactaccagctgctgcagaccatgtgc
ctgcgctccatgcagcaggcagtctacagtcccgacaacatggggcacttcggcctctcg
tatcccggctacagccatttcacgtcgcccatccgccgctatcccgacctgctgactcac
cgtgtcatcaaggcattgctggccgcagagcggtatgtgcccagcctggaagaccagccg
gtggtcattggccggacccagcgcgaacatgaacacgccatctgggaaaagctgggactg
gtcctgtccgcgagcgagcgccgcgccgacgaggcctcgcgcgatgtcgaggcctggctc
aagtgctggttcgtcaaggagcgtgtgggcgaggacttcagtggcacggtgaccggcgtc
gccagtttcggcatctttgtcacgctggataccctgcacgtcgaagggctggtgcatgtt
tccgagctgggcggcgagtacttccagttcaacgacgccttgcacgagctgcgtggcgag
cgcaccggcatgcgttaccgcctgaccgacaaggtccaggtacaggtgtcgcgcgtggat
ctggaggcgcgccgcatcgagttccgcctggtgcagggcacgagctttgacgccttgcgc
aaggcgtcggcccgcgggcccgacgaaccctcgcgccgcgtgaagaaggcggcgtcgccc
aagcccgcggcgctgaagggccagacggccaaggaacggcgtgccgaggccaagaaagcc
agcaagccgcccagggctcccaagaaggcccccaagcgcgccgcgccggccaagaaagcc
acgcacaagcgccattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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