KEGG   Amycolatopsis japonica: AJAP_00015
Entry
AJAP_00015        CDS       T03225                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
aja  Amycolatopsis japonica
Pathway
aja03030  DNA replication
aja03430  Mismatch repair
aja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AJAP_00015 (dnaN)
   03430 Mismatch repair
    AJAP_00015 (dnaN)
   03440 Homologous recombination
    AJAP_00015 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aja03032]
    AJAP_00015 (dnaN)
   03400 DNA repair and recombination proteins [BR:aja03400]
    AJAP_00015 (dnaN)
Enzymes [BR:aja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AJAP_00015 (dnaN)
DNA replication proteins [BR:aja03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AJAP_00015 (dnaN)
DNA repair and recombination proteins [BR:aja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AJAP_00015 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: AIG72944
UniProt: A0A075UJZ8
Position
2535..3668
AA seq 377 aa
MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDAGSDGTSDALTVSGFDYEVSATVG
VPATIADGGRLLVSGRLLADITKSLPAQPVEISVDGARATITCGSARFSLPTMPVEDYPQ
LPSQPAFAGELTGDAFGQAVTQVVVAAGKDDTLPMLTGMRLEISGSSLTLVATDRFRLAM
REFTWEPAEGLSDAAVLVPARTLAEAAKTLGASGAKIRLALASGEGLLGLSGSGRYTTTR
LLDAEFPPYRQLLPAQHTSRAVIEVSALAESIKRVSLVAERGTQVRLEFNDGSLRLSAGG
DDEGSAEEELQVDYEGEPVTIAFNPGYLVDGLGALNANRAELTFTTPNRPALIKPADEEG
NVVPGYLYLLMPVRLPG
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaagatccgcgtcgagcgtgacgggctggccgacgccgtcgcgtgggtggcgagaagc
ctcccgtcgcggcctccggtcccggttctgggcggtgtcctgctcgatgctggatccgac
gggacgagtgacgccctcaccgtctccggattcgactacgaggtctccgccacggtcggc
gtcccggccaccatcgccgacggcggccgtctgctggtctccggccgtctgctggccgac
atcaccaagtcgctgcccgcgcagccggtcgagatctccgtcgacggcgcccgcgcgacc
atcacctgcggctccgcgcgcttctccctgccgaccatgccggtcgaggactacccgcag
ctcccgtcccagcccgccttcgccggcgaactcaccggtgacgcgttcggccaggccgtc
acccaggtcgtcgtcgccgcgggcaaggacgacaccctcccgatgctgaccgggatgcgc
ctggagatctccggctcctcgctgaccctggtcgccaccgaccgcttccggctcgcgatg
cgcgagttcacctgggagccggccgagggtctgtccgacgccgccgtgctcgtcccggcg
cgcacgctcgccgaggccgcgaagacgctcggcgccagcggcgccaagatccggctcgcg
ctcgccagcggcgaaggcctgctcggtctctccggttccggtcgctacaccacgacccgc
ctcctcgacgcggagttcccgccgtaccggcagctgctgcccgcgcagcacacgtcgcgc
gcggtcatcgaggtctccgcgctcgccgagtccatcaagcgtgtttcgctcgtcgccgag
cgtggcacccaggtgcggctggagttcaacgacggttcgctgcggctctccgccggtggc
gacgacgagggttcggccgaggaagagcttcaggtcgactacgagggtgagccggtgacc
atcgcgttcaacccgggttacctcgtcgacgggctcggcgcgctgaacgcgaaccgggcg
gaactgacgttcaccaccccgaaccggccggcgctgatcaagcccgccgacgaggagggc
aacgtcgtccccggctacctgtacctcctgatgccggttcgcctcccgggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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