KEGG   Amycolatopsis japonica: AJAP_04740
Entry
AJAP_04740        CDS       T03225                                 
Name
(GenBank) Hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
aja  Amycolatopsis japonica
Brite
KEGG Orthology (KO) [BR:aja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aja03400]
    AJAP_04740
DNA repair and recombination proteins [BR:aja03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AJAP_04740
    Archaeal homologous recombinant proteins
     AJAP_04740
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_27 SMC_N ABC_tran AAA_21 TsaE NACHT AAA_22 nSTAND3
Other DBs
NCBI-ProteinID: AIG73870
UniProt: A0A075UUK0
Position
930739..933690
AA seq 983 aa
MRLHRLEVAAFGPYAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAIAFALFGTVPGAR
GEVKRLRCDLAEPDQVTEVVLELTVQGQRMRIARNPEYQRPKRRGEGMTVQQAKAVLSWV
GTVPAGHVAEGITRIDEVARTVERLIGMTHEQFFQVVLLPQGEFARFLRANTAEREELLE
RLFGTERFSDVEDWFANLRAERGRELQARQQSLREWGARFAQVAGQEAPEEGQAEWVGEV
LAESARRVGEAQERDTKARAAAKKAEAVWQENRSTAERIRRVRTAYTRLSVIAEQADQRA
EWAEEVEAAHRAAGVVAEADLLERRLDQLAEAEAAEALRAQEVPDAADSSAAELRARAGG
LREEAGALAELVAESEQQQRDLARREQLTAVADKAEKQAEEFAAELGAAPEKVTALRAEL
AAAAEAEAKLDGARARVDELTALARDADEVPKTRQVVERARVAVSEAVDGHQQARQHRLD
LRERRLEGMAAELAAGLHAGEDCPVCGATDHPSPATHTGGLVDPEDERHAETAEQQAHMR
REKAKAALQEAENRLTVLIGRLGAHTAETLRAELGEARALVAALSEAARRRPALETQVVA
LERKIEQLTEQRGAAERRAVEIATEVRGLTERLTERERRLESARGEFADVAARRRHLLGF
ATRLDALAEARLSVAGACERRDEQAKLVKEALRAKGFADLDEMRAAARPDEQITKLEASL
ADAKVMERAAREELAQPDLFGISPEDEIDVGASADAAQDTRGEAEQALVALRAATSRHAD
LTKLAERMTSLMADLAPVEERYLELKALAEVVNGRGQNARKMSLRSYVLAARLEEVAVAA
TARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSGTIRPAKTLSGGESFLASLSLA
LGLADVVAAETGGALLDTLFIDEGFGTLDAETLDIVMNILDELRAGGRVVGLVSHVEELR
QRIPTRLRVRKARTGSSVEIHAA
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgagactgcaccggttggaggtcgcggctttcggtccgtacgcgggccgcgaggtggtg
gacttcgacgcgctcggcgcggacgggctgttcctgctgcacggtgacaccggcgcgggg
aagacgacgctgctcgacgcgatcgcgttcgccttgttcggcaccgttcccggcgctcgc
ggcgaggtcaaacggctgcgctgcgacctcgccgagccggatcaggtcaccgaggtcgtc
ctcgaactgaccgtgcagggccagcggatgcggatcgcgcgcaaccccgagtaccagcgg
cccaagcgccggggcgaggggatgaccgtccagcaggcgaaggcggtgctcagctgggtc
ggcacggtgcccgccggccacgtcgccgagggcatcacgcggatcgacgaggtcgcgcgc
acggtcgaacgcctcatcggcatgacgcacgagcagttcttccaggtggtcctgctgccg
cagggcgaattcgcgcggttcctgcgcgcgaacaccgccgagcgcgaggagctgctggag
cgcctgttcggcaccgagcgcttctccgacgtcgaggactggttcgcgaacctgcgtgcc
gaacgcggccgcgagttgcaggcccggcagcagtcgctgcgggaatggggcgcccggttc
gcgcaggtcgcggggcaggaagcgcccgaagaggggcaggccgagtgggtcggcgaagtg
ctggccgaatcggcgcgccgcgtcggcgaggcccaggaacgtgacacgaaggcccgggcg
gcggccaagaaggcagaggccgtttggcaggagaaccggtcgaccgccgaacggatccgc
cgcgtgcgcaccgcgtacacgcggttgtcggtgatcgccgagcaggctgaccagcgggcg
gagtgggcggaagaggtcgaggcggcccatcgcgcggccggggtggtcgccgaggccgat
ctcctcgaacgcaggctggaccagctcgcggaggccgaagccgccgaggctctccgtgcc
caggaggttcctgacgcggcggacagttccgcagcggagctgcgcgctcgggcgggcggt
ttacgggaagaggcgggcgcgctcgccgaactcgtggcggaaagcgagcagcagcaacgg
gatctggctcggcgcgagcagctgaccgcggtcgcggacaaggcggagaagcaggccgag
gagttcgccgccgaactgggtgccgcgccggagaaggtcacggctttgcgtgccgaactg
gccgctgccgccgaagccgaagcgaagctcgacggcgctcgcgctcgtgtcgacgagctg
accgcgctagcccgcgacgccgacgaggtgccgaagacacggcaggtcgtcgagcgggcg
cgggtggcggtcagcgaggccgtggacggccatcagcaggcccggcagcaccggctggac
ctgcgggagcggcggctcgaagggatggcggccgaactcgccgccggtctccacgccgga
gaggactgcccggtctgcggggcgacggaccacccgtcgcccgcgacgcataccggtggc
ctggtcgatcccgaggacgaacggcacgccgaaaccgcggaacagcaggcgcatatgcgg
cgcgagaaggcgaaagccgcgttgcaggaggccgaaaaccgcctgaccgtcctgatcggg
cggttgggtgcgcacaccgcggagaccttgcgggccgagctcggcgaggcgcgcgctctg
gtcgccgcgctgtcggaagccgctcgccgacggcctgcgctcgagacacaggtcgttgcc
ctggaacggaagatcgagcagctgaccgaacagcgcggcgcggccgagcgtcgtgcggtc
gagatcgcgaccgaggtacgcggtctgacggagcggctgaccgaacgcgagcggcggttg
gagagcgcacgcggcgagttcgccgacgtcgcagcccggcgacggcatctgctcggcttc
gcgacccgcctcgacgcgctcgccgaagcgcggctaagtgtcgcgggtgcctgtgagcgg
cgtgacgagcaagcgaaactggtcaaggaagcgttgcgggccaagggattcgccgatctc
gacgagatgcgcgccgccgcgcggccggacgagcagatcacgaaactggaggccagcctc
gccgacgcgaaggtgatggagcgggccgcccgcgaggaactcgcgcaacccgacctgttc
ggcatctcgccggaggacgagatcgacgtcggtgcttcggcggacgcggcgcaggacaca
cgaggcgaggccgaacaggcgctcgtggcactgcgcgcggccacctcgcggcacgccgac
ctgacgaaactggccgagcggatgacgtccttgatggcggatctggcgccggtcgaagag
cggtacctggaactgaaggcactggccgaggtggtcaacgggcgcggccagaacgcgcgg
aagatgtcgttgcgctcgtatgtactggccgcgcggctggaggaggtcgcggtcgcggcg
accgcgcgtctgcggacgatgagccagggccgctactccttcgtgcactccgacgcggcc
ggggcacggggcacccgcggcggcctcggactcgacgtgctcgacgactactccggcacc
atccggcccgcgaagacgctgtcaggcggcgagtccttcctcgcgtcgctctcgctggcc
ctggggctcgccgacgtcgtcgccgccgaaaccggcggagcgctgctggacacgctgttc
atcgacgagggcttcggcacgctggacgccgagacgctcgacatcgtcatgaacatcctc
gacgagcttcgcgccggcgggcgagtggtcgggttggtgtcgcacgtggaggaactgcgg
cagcggatcccgacgcggctacgcgtccggaaggcgcgtacgggctcttcggtggagatc
cacgccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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