KEGG   Histoplasma mississippiense: HCAG_08895
Entry
HCAG_08895        CDS       T02229                                 
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
aje  Histoplasma mississippiense
Pathway
aje03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HCAG_08895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aje03021]
    HCAG_08895
Enzymes [BR:aje01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HCAG_08895
Transcription machinery [BR:aje03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     HCAG_08895
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 5442500
NCBI-ProteinID: XP_001536231
AA seq 1439 aa
MQSAEAVQIDLGKSQVVDRVPKVIKEIKFGVLSTQDIVSQAVVEVSDRKLFDLDNDRAVA
PHGPLDGRMGISSKSGTCDTCGGALQVCSGHFGHVKLVLPAFHVGYFKRVISILQEICKE
CSHILLPETERRAFLRELRRPGIDNLRRMQIAKKINERCRKTRTCYKCNAVNGVVKKAGT
SALKITHEKFRAFNASTSVKKIPPPSKVVFDKSFEEAKKSNPDIDKHFKKAHDDLHPLRV
LRLFRSVSNEDCELLSLNPEEARPEVFLWQYVPAPPVCIRPSVGQEAASTEDDLTAKLGD
IIQSNINLKNALIKGAPVQTIIECWDYMQLQLAVYINSDVPGLQKADFGKPIRGFCQRLK
GKQGRFRGNLSGKRVDFSGRTVISPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQ
RIRNGTKTWPGANYVLKKSQNFKMNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQP
SLHKLSILSHFAKVRPHRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARAEAMELMGVK
HNLATPKNGEPIISAIQDFITAAYLLSSKDVFYDRKTFTHICLYMLESDTRFDLPPPSVL
KPQILWTGKQVFNVLMRPNKQSPVLINLDAACREFKAPKGTPRDLDANDGWLCIRNSEIM
CGVMDKSTIGSGKKDSVFYVMLRDFGPDVASEGMNRLSRLSARWLTNLGFSIGITDVYPG
EKLLEEKHHIVEHAYAQCDEVIQLFKNGKLEKAPGCDEQMTMENAISGLLSKVRQQAGEI
CIAELSRWNSPLIMATSGSKGSDINVAQMVALVGQQIIGNQRVQDGFQDRTLPHFPKYAR
QPPAKGFVRNSFFSGLTPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSTRY
DDTVRNSSSNIVQFQYGDDKLDPVDMEGRAKPVHFDRTFTHAEVTTFDNSDKGLLPDEII
TLCQNLLAPERAKLARFDLSGKKLEYNDRSDHGIDQLESARDFLQSIEDYRGKGVIHTAK
VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ
GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE
AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFKSADLKFRSFGSHIHIFVDQQTARTA
LSKAEEAATGADPYIRLKHLKRLIPNIQVIGHSQCARAIIRTDETNTTNTLLVEGYGLRD
CMTTDGINGRHTRTNNIMETRAVLGIEAARTTIVDEIGEVMKDMAIDPRHMQLLADVMTY
KGEVLGITRFGLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIVGKSVSLG
TGAMEVVRALNFYEGQIGRRKTAFEDAWEEICEARGCSTGVEGKGVVPRVMKKRRKEAV
NT seq 4320 nt   +upstreamnt  +downstreamnt
atgcagtctgcagaggctgtacaaatcgacctggggaaatcccaggtcgtggatcgcgtg
cctaaggtcatcaaggagataaaattcggcgtcctctcgacccaagatatcgtgagtcaa
gccgtcgttgaggtttctgataggaagctcttcgatctcgacaatgaccgcgctgtcgcc
ccccatggcccgctcgacgggcgcatgggaatatcgagtaaatcgggtacttgcgacacc
tgcggcggagcactacaggtctgtagcggacatttcgggcatgtaaagctggttcttccg
gctttccatgtgggttattttaaacgggttattagcattttgcaggagatttgcaaggaa
tgctcacacatactccttcccgaaaccgagcgcagggcgtttcttagagaattaagacgg
cctggtatagataacctcaggcgcatgcagattgcgaagaagatcaacgagcgatgtcga
aaaacgcggacctgctacaaatgcaacgcagtcaatggtgtggtgaagaaagccggaaca
agcgcactgaaaatcactcatgagaaattccgagccttcaacgcgtccacgtctgtgaag
aaaattcccccgcccagcaaagttgtcttcgacaagtcattcgaagaagccaagaaaagc
aatccggatatcgacaaacatttcaaaaaggcccacgacgatctacatccactgcgcgtg
ctgagactgtttcggtccgtttctaacgaagactgcgagctccttagcctgaatcccgag
gaggctcggccagaagtgtttctctggcaatacgttccggctccgcctgtgtgcattcgt
ccatcggttggacaggaggcggctagtaccgaagatgacttgacagcaaaactgggagat
atcatccaaagcaatatcaatctcaaaaatgcactcatcaagggtgcaccggtacagacc
attatcgaatgctgggactatatgcagctgcagctcgcagtgtatatcaacagtgatgtg
ccgggtttacagaaggctgattttggaaagcctattcggggcttctgccaacgactcaaa
gggaaacaggggcgattccgtggaaatctttcagggaaacgagtggatttctctggtaga
accgttatttctccagacccgaatctgcgtgtcaacgaggttgctgttcctcagcttgtt
gccatgaacatgacttatcccgaacaggtgacaagatataataaagaaaaactccgtcaa
cgcattcgaaatggcacaaagacttggccgggagcaaattacgtcttaaagaaaagtcag
aattttaaaatgaacttgaaatttggtaaccccaacctggttgcgaacgagttggaggaa
ggggatattgttgagcggcatattgaagatggagacatcgttctcttcaaccgacaaccg
tccctccacaaactcagtattctttcccattttgccaaggttaggcctcaccgaacattc
cgtctgaatgagtgtgtatgtaacccatacaatgccgattttgatggcgatgaaatgaat
ctacatgtccctcaaacggaagaagcgagggccgaagcgatggaattgatgggagttaaa
cataatctggctacaccaaaaaacggcgaacccatcatttccgctattcaggatttcatc
actgctgcttacttgctgagtagtaaagatgttttctatgatcgcaaaactttcacacac
atctgcctctacatgcttgaatccgatacccgttttgaccttccgccgccctcagtacta
aaaccccaaatattgtggacagggaaacaagtcttcaacgtgttgatgcgacccaataag
caatctccggttttaattaatttagacgcagcatgtcgagaattcaaagcgccgaaagga
actcctcgtgacttggatgctaatgatggatggctttgcattcgtaactccgaaatcatg
tgtggtgtcatggataagtctaccatcggatccggcaagaaagactcggtattttatgtt
atgcttcgagatttcggccctgatgtcgcatctgaaggcatgaaccggctctcaaggctg
tccgctagatggctcaccaacctaggtttctcgatcggtataacagacgtataccctggt
gaaaaacttttagaggagaaacaccatatagtagaacatgcttacgcgcagtgtgatgaa
gttattcaactatttaaaaacgggaagcttgagaaggctccaggctgcgacgagcagatg
acaatggaaaatgcgatatccggtttactcagtaaagttcggcagcaagccggagagatc
tgtatcgcggaactgagtagatggaactctcccctgatcatggccacttcagggtccaag
ggttcggatattaacgtcgctcagatggttgcccttgtcggtcaacaaattatagggaat
caacgggttcaggacggctttcaagatcgaacgttacctcatttccccaagtatgctcgc
caacctcccgcgaaaggtttcgtgcggaacagtttcttttcggggttgacaccaacggaa
tttcttttccacgccatttccggaagagaaggtctcgtcgatacagcagttaagactgcg
gaaactggttacatgtcccgtaggttgatgaaatctcttgaagacctatcaacgcggtac
gatgataccgtaaggaattcgtcttcaaatattgtgcagttccagtatggtgacgataaa
ttggaccctgtcgatatggagggccgagctaaaccagtccactttgatcgcacgtttacc
catgctgaggtgacaacctttgataactccgacaaaggccttcttccggatgagataata
actttgtgtcaaaacttactcgctcctgagcgggccaagcttgcaagatttgacctgtca
ggcaagaagttagagtataatgacagaagtgatcacggcatagatcagctggaaagcgcc
agagattttctccagtccattgaggattatcggggaaagggcgtaattcataccgcaaaa
gtgtcaaccagagctctcacttcattcatcaccgcctgcttaaccaagtataagagagct
caagttgaaccaggtcatgcagtgggtgcagtcggtgcacagtccattggagaaccgggg
acgcagatgacattgaaaactttccatttcgctggcgttgctggtatgagtataactcaa
ggtgtaccgcgtatcaaagagattatcaatgcttccaaggaaatcagtacaccagttatc
acctgtgagcttgtcaataagcaagaccttcgcgcagcgcagattgtaaagggccgagtg
gaaaagacctttgtccgagatatcatttattatatcgaggaagattggaccggaaatgaa
gcgtacatcaatattaaaatcgacttttccaccattcaaaacctacaactcgaactaacc
ctccaagatatccttatggccattaaaaaacacaagcgattcaaatctgcagatctaaaa
tttcgttccttcggctcacacattcacattttcgtcgatcaacaaactgcccgaaccgct
ctctccaaagctgaagaagctgctaccggtgctgacccgtatatccgccttaaacatctc
aaacggctcattcccaacattcaggttatcggccattcccaatgtgcgcgagccatcata
cgcacagacgaaacaaacacaaccaacaccctgcttgtggaaggttacggtctgcgtgac
tgcatgaccaccgacggtatcaacggtcgccacacacgcacaaacaacatcatggaaaca
cgtgccgtgctcggcatcgaagccgcgagaacgaccatcgtcgacgagattggcgaggtt
atgaaagacatggccattgacccaagacacatgcagttgcttgcggacgtcatgacatac
aagggtgaggttttggggataacccggtttggcctcgccaagatgcgcgattccgtgcta
caactcgctagttttgagaagacagcggaccatctgttcgatgcgggcggggccgggagg
actgatcttatcgagggagtgtcggagtgtattattgtggggaagagtgtgtccctgggc
acaggggcgatggaagtagtacgcgccctcaacttttatgagggccagattggacggagg
aagacggcttttgaagacgcgtgggaggagatttgtgaggctcggggctgtagtaccggg
gtagaaggcaaaggggtagtcccgagggtcatgaagaaacgaaggaaggaagccgtatga

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