KEGG   Histoplasma mississippiense: HCAG_08910
Entry
HCAG_08910        CDS       T02229                                 
Name
(RefSeq) DNA repair protein Rex1
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
aje  Histoplasma mississippiense
Pathway
aje03022  Basal transcription factors
aje03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HCAG_08910
  09124 Replication and repair
   03420 Nucleotide excision repair
    HCAG_08910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aje03021]
    HCAG_08910
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_08910
Transcription machinery [BR:aje03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HCAG_08910
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HCAG_08910
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 5442549
NCBI-ProteinID: XP_001536246
AA seq 72 aa
MPRAVKGVLIECDPSVKAIILKYDQERHDYIVEDLDDERHLVIKESQLPHLKARLSNELD
EKIMQPEESESE
NT seq 219 nt   +upstreamnt  +downstreamnt
atgccacgcgctgtaaaaggtgtcctgatagaatgcgacccatccgtcaaagccataatc
ctaaaatacgaccaggagcggcacgattacatcgtcgaggacctcgatgacgagcgccat
ctggtgatcaaggaaagccagttgccgcatctgaaggcgcgcttgagtaacgagctggat
gagaagatcatgcaaccggaggagtccgaatcggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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