KEGG   Acinetobacter junii: BVL33_12605
Entry
BVL33_12605       CDS       T04674                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
ajn  Acinetobacter junii
Pathway
ajn03030  DNA replication
ajn03430  Mismatch repair
ajn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ajn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BVL33_12605
   03430 Mismatch repair
    BVL33_12605
   03440 Homologous recombination
    BVL33_12605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ajn03032]
    BVL33_12605
   03400 DNA repair and recombination proteins [BR:ajn03400]
    BVL33_12605
Enzymes [BR:ajn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BVL33_12605
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     BVL33_12605
DNA replication proteins [BR:ajn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BVL33_12605
    RNase H
     BVL33_12605
DNA repair and recombination proteins [BR:ajn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BVL33_12605
SSDB
Motif
Pfam: RNase_H RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: APU49277
UniProt: A0A4T1A2B3
Position
2587643..2588989
AA seq 448 aa
MSQTITLYVDGACKGNPGLGGWGAYIITETEEHKIYGGELETTNNRMELTAAIEGVSFCP
VDAHLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKKLDAVCANRNIEWNWIKGHA
GHPGNEMADQLANMGAEQTAKQSSKMTQANADTKKPESDWLLDDPFGLDLDAEADELIEE
IEIDLQVTEQIEEIIEVKSVNESSNPYIVITDAKLNLQGPRQLILDTETTGFYYQDNDRI
IEVGAIEMINRKLTGSSIHIYINPEKPVGDSVDVHGITDEFLADKPKYAEIADVLFEFLK
GAEIIAHNATFDMNFLDMEFKRAGLPALSEVCEVTDTLALAKNKHPGQKNSLDSLVRRYE
IPARDRTFHGALLDAEILADVYLAMTGGQVSFDMDALSQTEQQQNKTTRQRVQIDLPIIY
PTDDELQQHETWVKQFEEKHGKPCFFAK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtctcaaacaatcacactttatgtagatggcgcatgtaaaggcaatccaggattaggt
ggttggggggcttatatcattacagaaaccgaagagcataaaatttatggtggtgagcta
gaaacgaccaataatcgaatggaattaactgcagcgatagaaggtgtttctttttgccca
gtcgatgctcacctaattatctggacagattcaaactatgtaaaacaaggtatcactgaa
tggatacatggttggaaaaagaaaaattggaaagatgttaaaaaccctgatttgtggaaa
aaattagacgccgtgtgcgcaaatagaaatattgagtggaactggatcaaaggtcatgcg
ggccatccaggaaatgaaatggctgatcaactagcaaacatgggtgctgaacaaactgca
aaacaaagctcaaaaatgacgcaggctaacgctgatacaaaaaagcctgaatctgattgg
ctactcgatgatccctttggtttagacctcgatgcagaagcagatgagttgattgaagag
attgaaattgatttacaagtcacagagcaaatcgaagaaattatagaggttaaatctgta
aatgaatcttcaaacccatacattgtaattacagatgcaaaattaaatctacaaggccct
cgccaattgattctagatacagaaacgacaggtttctattatcaagacaacgatcgaatc
attgaggtgggtgcaatcgaaatgattaatcgtaagcttacaggtagttctattcatatt
tatattaacccagaaaaaccagttggcgactcagtcgatgtacacggtatcactgatgaa
ttcttagcggacaaacctaaatatgctgaaatcgcagatgtacttttcgaatttttaaaa
ggtgctgaaattattgcacataatgcgaccttcgatatgaacttcttagatatggagttt
aaacgcgcggggcttccagcattatcagaagtttgtgaagttacggatacactcgctctt
gctaaaaacaagcatcccggtcaaaaaaattcactcgattccttagtccgtcgttatgaa
attcctgctcgcgatcgtaccttccacggtgcattactcgatgctgaaattttggctgat
gtttacttggcgatgacaggtggacaagtctcatttgatatggatgccttatcccaaacc
gaacaacaacagaataaaaccactcgtcaacgcgtacaaattgatttgccaattatttac
ccgactgatgatgaacttcagcaacatgagacttgggtcaaacaattcgaagaaaaacat
ggaaaaccatgcttttttgcaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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