KEGG   Amphritea japonica: AMJAP_0498
Entry
AMJAP_0498        CDS       T06992                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase nonessential primary-like sigma factor
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
ajp  Amphritea japonica
Brite
KEGG Orthology (KO) [BR:ajp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajp03021]
    AMJAP_0498 (rpoS)
Transcription machinery [BR:ajp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AMJAP_0498 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 DUF4168
Other DBs
NCBI-ProteinID: BBB25097
UniProt: A0A7R6SS14
Position
543993..544985
AA seq 330 aa
MENVENSEQDLDQVAVDSDAKDKAKAKPGADPAFLNSGRGKGSMAHNDLLNAKSLDATQL
YLNEIGFSPLLTAEEEVYFSRRALKGDEASRKRMIESNLRLVVKIARRYINRGLTLLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLR
AARELAQKLDHEPTVEEIADAVDKPVENVEKMFGLNERVTSVDVPVGKDSDKMLLETIAD
EESSDPETLLQKSNISGNLENWLSLLPEKHSEVLSRRFGLRGYEMSTLEEVGKEIGLTRE
RVRQIQVEALRKLREIVERNGLSGEDLLKE
NT seq 993 nt   +upstreamnt  +downstreamnt
atggaaaatgtagaaaatagcgagcaggacctggatcaggtagcggttgattcagatgca
aaggataaagcaaaagccaaaccaggcgcagatcctgcctttttaaatagcgggcgcggc
aagggcagtatggctcataacgacctgcttaatgctaaatctctggacgccacgcaactg
tatttgaatgagatcggcttctcaccgctgctgactgcggaggaggaagtctacttctct
cgtcgagccctgaaaggggatgaagcgtcccgtaaacgcatgattgaaagtaatttacgt
ctggtggtgaaaattgcccgtcgttacatcaatcgcggacttactctgctggatcttatt
gaagagggtaatctgggactgatcagggcggtagagaaatttgaccctgagcgcgggttt
cgtttttctacctatgctacctggtggatacgccagacgattgaacgggcaattatgaat
cagacccggactattcgtttacccattcatgtagtgaaagaactcaatgtttatctgcgt
gctgcccgtgagctggcgcagaagcttgatcatgaaccgacggttgaagagatcgctgat
gcagtcgataaaccggtagaaaatgtcgaaaagatgttcggactgaatgagcgggttacc
tcggtggatgtccctgtgggtaaagattctgacaaaatgttgttggaaacgattgctgat
gaagagtcgtcagatccggagacgttgcttcaaaaatccaatattagcggcaatcttgaa
aactggttgagtttattacctgagaagcactcagaggttctgtctcgtcgttttgggttg
cggggatatgagatgagcacgctggaagaagtaggcaaagagatcggcttgacccgggag
agggtgcgacagattcaggtagaagcgctacgtaaactgcgcgaaattgttgaacgtaac
ggtttaagtggcgaagatctgctaaaagaatag

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