KEGG   Acidovorax sp. JS42: Ajs_2910Help
Entry
Ajs_2910          CDS       T00455                                 

Definition
(GenBank) Conjugal transfer protein TrbC
  KO
K20528  type IV secretion system protein TrbC
Organism
ajs  Acidovorax sp. JS42
Pathway
ajs02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ajs00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Ajs_2910
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ajs02044]
    Ajs_2910
Secretion system [BR:ajs02044]
 Type IV secretion system
  Trb secretion system protein
   Ajs_2910
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: TrbC
Motif
Other DBs
NCBI-ProteinID: ABM43051
UniProt: A1W9X6
Position
complement(3084659..3085036)
Genome map
AA seq 125 aa AA seqDB search
MTHADAFRISANPLPRPARLDGLARPAMQGLMLAALMLLLAGTAQAAGSSMPWEGPLQSI
LESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFS
GGAVV
NT seq 378 nt NT seq  +upstreamnt  +downstreamnt
atgacgcacgctgatgctttccgtatttccgcaaatccgcttcctcggcccgcacggctg
gatggcctggctcgcccggccatgcagggcttgatgctcgcggcgctgatgttgctgctc
gcaggcaccgcgcaggccgcgggttcctcgatgccctgggaagggccgctgcaatccatc
ctcgaatccatccaggggccggtggcgcgcatcgtcgcggtcatcatcatcatcgccacg
ggcttggcgctggccttcggcgatacctcgggcgggttccgcaagctgatccagatcgtg
tttggcctgtccatcgcgttcgccgcttcgagcttcttcctgtcgttcttcagcttctcc
ggtggggccgtcgtatga

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