KEGG   Acinonyx jubatus (cheetah): 106971661
Entry
106971661         CDS       T04657                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03020  RNA polymerase
aju03420  Nucleotide excision repair
aju05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106971661
  09124 Replication and repair
   03420 Nucleotide excision repair
    106971661
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    106971661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aju03021]
    106971661
   03400 DNA repair and recombination proteins [BR:aju03400]
    106971661
Enzymes [BR:aju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106971661
Transcription machinery [BR:aju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     106971661
DNA repair and recombination proteins [BR:aju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106971661
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 106971661
NCBI-ProteinID: XP_014924016
UniProt: A0A6I9ZMU8
Position
B1:complement(156306952..156348383)
AA seq 1174 aa
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcaccccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacagcagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgccccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatatttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgctccttcaccaatgatgccaaacgaggccagattaagaaatctcacgtat
tctgctcccctttatgttgacataaccaaaactgtcattaaagaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggtttaacagatcgtgatctttgtgagttaaatgaatgccccttggat
ccaggtggatatttcattattaatgggtcagaaaaggttctgattgctcaagaaaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacccaccagtactatttgggttagcatgctg
gcgagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggcaacgcta
ccgtacatcaagcaggaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaagaacagaatgttgcactgaatttc
attggctcaagaggggcaaagcctggtgtcaccaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgtcggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcatcggttgcttttagcagctttgggtagaaga
gaattagatgacagggatcactatggaaacaaaagattggatcttgctggaccactactt
gcattcttattcagaggtatgtttaagaatttgcttaaagaggtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattcgttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtgttaaaccgcctgacatttgcatctactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctagcaaaaccaagacaa
ttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcagccttctcca
attcttgaatttttagaagaatggagtatggaaaatttagaagaaatatctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctgaggaagttgcggcgacagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctataccgatgcaggacgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttctaaagaagagacatatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgcgagattcatcca
tcgatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggaatatctacgatttagagagctgccagcaggtatcaactccattgtg
gcgatagcatcttacactggatataatcaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgttttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaacccgtgaaacatgccaaggtatg
aggcatgccatttatgacaagctggatgatgatggtttgatagctcctggagtccgtgtg
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatcgacgctataccaagagagattgtagcacatttcttagaactagtgag
acgggaattgtggatcaggttatggtaactctcaatcaggaaggatataagttttgtaaa
ataagggtccgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaaaggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catctcagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacaa
atttttattggtcctacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccctatcaggttcatgtttgcaat
ctttgtggaataatggcaattgctaacacgaggacccatacatatgaatgtcggggctgt
cgcaataaaactcagatttctttggtgcgaatgccttatgcgtgcaaactgctgtttcag
gaacttatgtctatgagtattgcgcctcgaatgatgagcgtctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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