KEGG   Acinonyx jubatus (cheetah): 106973585
Entry
106973585         CDS       T04657                                 
Name
(RefSeq) symplekin isoform X1
  KO
K06100  symplekin
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03015  mRNA surveillance pathway
aju04530  Tight junction
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106973585
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    106973585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aju03021]
    106973585
   03019 Messenger RNA biogenesis [BR:aju03019]
    106973585
Transcription machinery [BR:aju03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     106973585
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     106973585
    U7-dependent histone pre-mRNA processing factors
     106973585
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT
Other DBs
NCBI-GeneID: 106973585
NCBI-ProteinID: XP_026893641
UniProt: A0A6J1XMH7
Position
E2:complement(50285964..50320131)
AA seq 1273 aa
MAGSSGDSITRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSSSSSTRPGPPQPEETIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKEATGGLTSKEERSPQTLTPAGEDTVKTPSPA
AEESGEPETKGNS
NT seq 3822 nt   +upstreamnt  +downstreamnt
atggcaggcagcagcggagatagtatcactcgccggagtgtggcatcccagtttttcacg
caagaggaggggccgggcatcgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcggcactgatcaccaatgactcgaagatcacagtactcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggacgagatcatcgctttc
caggcggacaagtcaattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aaacgagacattgagttactcctgaaactgatcgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtccgccatggctggtgacatcattctgctgctggattctgataatgacggcatccgc
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggcagac
tcggaggtgccccgccgccaggagcatgatatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagagggcaaggcagctttggagcagttgctc
aagttcatggtgcatcccgccatctcctccatcaacctgaccacagctctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc
ctgcatgccaacctgccccctacgctggccaaatcccaggtgagcagcgtgcgcaagaac
ctcaagttgcacctgttgagtgtcctgaagcacccggcctccttggagtttcaggcccag
attaccaccctgctggtggacctaggcacacctcaagctgagattgcccgcaatatgccc
agcggcaaggatgcccgcaagcggccccgggacgactcggattccacgctcaagaagatg
aagttagagcccaacctgggggaagatgatgaggacaaggacttggagccgggcccatcg
ggaacctccaaggcctcagcccagatctcaggccagtcagatacagacatcaccgccgag
ttcctgcagcctttgctgacacctgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagccatctatacccccgtggaatcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg
ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggaaaag
gtggtgaagccagagagtgtcctgattaagcgacgcctgtcggcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctactctggaggaggaggcgccccaggccaag
aggaggccagagcccatcatccctgtcacacagccccggctggcgggcgctggtgggcgc
aagaaaatcttccgtctgagcgatgtgctcaagcccctgaccgacgcccaggttgaggct
atgaagctgggcgccgtgaagcggatcctccgggcagagaaggccgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctggccagtctggtgacacagtttgactcgggcctg
aaggccgaggtcttgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcttggctctaccaggagtacaatgcctacctggcagctggtgcctcgggcaccctggac
aagtacgaggactgccttatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtgctagaggcaccgctgatcactgagagcgccctggag
gtgattcgcaagtactgcgaggatgagagtcgcacttacctgggcatgtctactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatgtac
gaaaaggagcagctgcgagagtatgtggagaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccatctgtgctatttggagctgacaaggacacagaggtggcagcg
ccctggaccgaggagacagtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctgatccacgaactggccgccgtgtacactgaggccatcgctgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccgccctccccggagctggtgaagcgggtccgggatctc
tatcacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccgctg
aaccctggagagctgcttattgcgttgcacaacattgactcggtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgcttatgagg
accgtcatccagtctctgaccatgtacccccgcctgggggggttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagttgccaccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcccgcggggcccctggaagaggacgac
ctggagcccctggccctggccccagccccagccccccggccccctcaggacctcatcggc
cttcggctggcccaggagaaagccttaaagcggcagctggaggaggaacagaagctgaag
ccgggaggagtgggagccccctcgtcctcctcctcgtcctcctcttcctccacccggcca
ggccctccccagcccgaggaaaccatagatttccgggaggaggggcctgagtgtgagacc
cccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgcactcctggac
tctagtctcgaggggcccctaccgaaggaggcaacaggcgggttgacctcaaaggaggag
cgcagcccccagaccctcacccctgccggagaagataccgtgaagacccccagccccgcc
gccgaggaatccggggaacccgagaccaaggggaacagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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